Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16732 | 50419;50420;50421 | chr2:178612331;178612330;178612329 | chr2:179477058;179477057;179477056 |
N2AB | 15091 | 45496;45497;45498 | chr2:178612331;178612330;178612329 | chr2:179477058;179477057;179477056 |
N2A | 14164 | 42715;42716;42717 | chr2:178612331;178612330;178612329 | chr2:179477058;179477057;179477056 |
N2B | 7667 | 23224;23225;23226 | chr2:178612331;178612330;178612329 | chr2:179477058;179477057;179477056 |
Novex-1 | 7792 | 23599;23600;23601 | chr2:178612331;178612330;178612329 | chr2:179477058;179477057;179477056 |
Novex-2 | 7859 | 23800;23801;23802 | chr2:178612331;178612330;178612329 | chr2:179477058;179477057;179477056 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1419646565 | -0.449 | 1.0 | D | 0.927 | 0.736 | 0.857878773519 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
G/R | rs1419646565 | -0.449 | 1.0 | D | 0.927 | 0.736 | 0.857878773519 | gnomAD-4.0.0 | 1.59388E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86239E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.9089 | likely_pathogenic | 0.884 | pathogenic | -0.732 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.823066689 | None | None | I |
G/C | 0.9685 | likely_pathogenic | 0.9564 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
G/D | 0.9903 | likely_pathogenic | 0.9867 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | I |
G/E | 0.992 | likely_pathogenic | 0.989 | pathogenic | -1.417 | Destabilizing | 1.0 | D | 0.917 | deleterious | D | 0.823066689 | None | None | I |
G/F | 0.9949 | likely_pathogenic | 0.9938 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | I |
G/H | 0.9955 | likely_pathogenic | 0.9931 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
G/I | 0.9965 | likely_pathogenic | 0.9956 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | I |
G/K | 0.996 | likely_pathogenic | 0.9945 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | I |
G/L | 0.9931 | likely_pathogenic | 0.9921 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
G/M | 0.9972 | likely_pathogenic | 0.9962 | pathogenic | -0.496 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
G/N | 0.9898 | likely_pathogenic | 0.9836 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
G/P | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -0.666 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | I |
G/Q | 0.9903 | likely_pathogenic | 0.9853 | pathogenic | -1.21 | Destabilizing | 1.0 | D | 0.924 | deleterious | None | None | None | None | I |
G/R | 0.9861 | likely_pathogenic | 0.9796 | pathogenic | -0.679 | Destabilizing | 1.0 | D | 0.927 | deleterious | D | 0.771760824 | None | None | I |
G/S | 0.8655 | likely_pathogenic | 0.8123 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/T | 0.979 | likely_pathogenic | 0.9683 | pathogenic | -1.111 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | I |
G/V | 0.9924 | likely_pathogenic | 0.9904 | pathogenic | -0.666 | Destabilizing | 1.0 | D | 0.899 | deleterious | D | 0.736435212 | None | None | I |
G/W | 0.9936 | likely_pathogenic | 0.9914 | pathogenic | -1.462 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
G/Y | 0.9946 | likely_pathogenic | 0.9926 | pathogenic | -1.14 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.