Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16734 | 50425;50426;50427 | chr2:178612325;178612324;178612323 | chr2:179477052;179477051;179477050 |
N2AB | 15093 | 45502;45503;45504 | chr2:178612325;178612324;178612323 | chr2:179477052;179477051;179477050 |
N2A | 14166 | 42721;42722;42723 | chr2:178612325;178612324;178612323 | chr2:179477052;179477051;179477050 |
N2B | 7669 | 23230;23231;23232 | chr2:178612325;178612324;178612323 | chr2:179477052;179477051;179477050 |
Novex-1 | 7794 | 23605;23606;23607 | chr2:178612325;178612324;178612323 | chr2:179477052;179477051;179477050 |
Novex-2 | 7861 | 23806;23807;23808 | chr2:178612325;178612324;178612323 | chr2:179477052;179477051;179477050 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs1227059346 | None | 0.104 | N | 0.461 | 0.102 | 0.0762999501168 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/G | rs1227059346 | None | 0.104 | N | 0.461 | 0.102 | 0.0762999501168 | gnomAD-4.0.0 | 6.5825E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47206E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3574 | ambiguous | 0.5584 | ambiguous | -0.834 | Destabilizing | 0.98 | D | 0.68 | prob.neutral | None | None | None | None | N |
S/C | 0.6727 | likely_pathogenic | 0.8132 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | D | 0.728166796 | None | None | N |
S/D | 0.987 | likely_pathogenic | 0.9866 | pathogenic | -1.546 | Destabilizing | 0.996 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/E | 0.9937 | likely_pathogenic | 0.9948 | pathogenic | -1.434 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
S/F | 0.9963 | likely_pathogenic | 0.9977 | pathogenic | -0.659 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
S/G | 0.1821 | likely_benign | 0.1751 | benign | -1.161 | Destabilizing | 0.104 | N | 0.461 | neutral | N | 0.425422303 | None | None | N |
S/H | 0.9896 | likely_pathogenic | 0.9916 | pathogenic | -1.527 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
S/I | 0.9937 | likely_pathogenic | 0.996 | pathogenic | -0.032 | Destabilizing | 0.999 | D | 0.782 | deleterious | D | 0.690914888 | None | None | N |
S/K | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -0.793 | Destabilizing | 0.996 | D | 0.749 | deleterious | None | None | None | None | N |
S/L | 0.9746 | likely_pathogenic | 0.9844 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
S/M | 0.9796 | likely_pathogenic | 0.9861 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
S/N | 0.9449 | likely_pathogenic | 0.9507 | pathogenic | -1.192 | Destabilizing | 0.994 | D | 0.727 | prob.delet. | D | 0.726088997 | None | None | N |
S/P | 0.9947 | likely_pathogenic | 0.996 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
S/Q | 0.9919 | likely_pathogenic | 0.9945 | pathogenic | -1.156 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
S/R | 0.9977 | likely_pathogenic | 0.9985 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.759 | deleterious | D | 0.668088732 | None | None | N |
S/T | 0.7348 | likely_pathogenic | 0.7509 | pathogenic | -0.94 | Destabilizing | 0.994 | D | 0.7 | prob.neutral | D | 0.664942663 | None | None | N |
S/V | 0.9841 | likely_pathogenic | 0.9909 | pathogenic | -0.266 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
S/W | 0.9964 | likely_pathogenic | 0.9974 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
S/Y | 0.9923 | likely_pathogenic | 0.9953 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.