Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16740 | 50443;50444;50445 | chr2:178612307;178612306;178612305 | chr2:179477034;179477033;179477032 |
N2AB | 15099 | 45520;45521;45522 | chr2:178612307;178612306;178612305 | chr2:179477034;179477033;179477032 |
N2A | 14172 | 42739;42740;42741 | chr2:178612307;178612306;178612305 | chr2:179477034;179477033;179477032 |
N2B | 7675 | 23248;23249;23250 | chr2:178612307;178612306;178612305 | chr2:179477034;179477033;179477032 |
Novex-1 | 7800 | 23623;23624;23625 | chr2:178612307;178612306;178612305 | chr2:179477034;179477033;179477032 |
Novex-2 | 7867 | 23824;23825;23826 | chr2:178612307;178612306;178612305 | chr2:179477034;179477033;179477032 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1314963445 | -0.056 | None | N | 0.283 | 0.106 | 0.235038932564 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1314963445 | -0.056 | None | N | 0.283 | 0.106 | 0.235038932564 | gnomAD-4.0.0 | 6.57903E-06 | None | None | None | None | I | None | 2.41441E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs771586396 | 0.737 | 0.058 | N | 0.456 | 0.115 | 0.258779203287 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs771586396 | 0.737 | 0.058 | N | 0.456 | 0.115 | 0.258779203287 | gnomAD-4.0.0 | 2.05414E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79978E-06 | 1.16012E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1963 | likely_benign | 0.1928 | benign | -0.028 | Destabilizing | 0.001 | N | 0.341 | neutral | N | 0.469450621 | None | None | I |
E/C | 0.905 | likely_pathogenic | 0.9052 | pathogenic | -0.284 | Destabilizing | 0.869 | D | 0.489 | neutral | None | None | None | None | I |
E/D | 0.2243 | likely_benign | 0.1995 | benign | -0.346 | Destabilizing | 0.058 | N | 0.481 | neutral | N | 0.461625683 | None | None | I |
E/F | 0.9032 | likely_pathogenic | 0.901 | pathogenic | -0.079 | Destabilizing | 0.637 | D | 0.521 | neutral | None | None | None | None | I |
E/G | 0.1807 | likely_benign | 0.2012 | benign | -0.135 | Destabilizing | None | N | 0.283 | neutral | N | 0.470345501 | None | None | I |
E/H | 0.7532 | likely_pathogenic | 0.728 | pathogenic | 0.589 | Stabilizing | 0.869 | D | 0.358 | neutral | None | None | None | None | I |
E/I | 0.6369 | likely_pathogenic | 0.6057 | pathogenic | 0.196 | Stabilizing | 0.221 | N | 0.589 | neutral | None | None | None | None | I |
E/K | 0.3313 | likely_benign | 0.3254 | benign | 0.341 | Stabilizing | 0.058 | N | 0.456 | neutral | N | 0.471296159 | None | None | I |
E/L | 0.6321 | likely_pathogenic | 0.6054 | pathogenic | 0.196 | Stabilizing | 0.075 | N | 0.521 | neutral | None | None | None | None | I |
E/M | 0.6693 | likely_pathogenic | 0.6557 | pathogenic | -0.083 | Destabilizing | 0.869 | D | 0.504 | neutral | None | None | None | None | I |
E/N | 0.4437 | ambiguous | 0.421 | ambiguous | 0.119 | Stabilizing | 0.075 | N | 0.443 | neutral | None | None | None | None | I |
E/P | 0.4879 | ambiguous | 0.4795 | ambiguous | 0.139 | Stabilizing | 0.366 | N | 0.476 | neutral | None | None | None | None | I |
E/Q | 0.26 | likely_benign | 0.2481 | benign | 0.12 | Stabilizing | 0.303 | N | 0.476 | neutral | N | 0.496400668 | None | None | I |
E/R | 0.4686 | ambiguous | 0.4743 | ambiguous | 0.611 | Stabilizing | 0.366 | N | 0.423 | neutral | None | None | None | None | I |
E/S | 0.2474 | likely_benign | 0.2448 | benign | -0.029 | Destabilizing | 0.039 | N | 0.392 | neutral | None | None | None | None | I |
E/T | 0.2879 | likely_benign | 0.2761 | benign | 0.066 | Stabilizing | 0.001 | N | 0.317 | neutral | None | None | None | None | I |
E/V | 0.42 | ambiguous | 0.3896 | ambiguous | 0.139 | Stabilizing | 0.058 | N | 0.49 | neutral | N | 0.459626182 | None | None | I |
E/W | 0.9608 | likely_pathogenic | 0.9625 | pathogenic | -0.038 | Destabilizing | 0.869 | D | 0.539 | neutral | None | None | None | None | I |
E/Y | 0.859 | likely_pathogenic | 0.8575 | pathogenic | 0.143 | Stabilizing | 0.637 | D | 0.535 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.