Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16746 | 50461;50462;50463 | chr2:178612289;178612288;178612287 | chr2:179477016;179477015;179477014 |
N2AB | 15105 | 45538;45539;45540 | chr2:178612289;178612288;178612287 | chr2:179477016;179477015;179477014 |
N2A | 14178 | 42757;42758;42759 | chr2:178612289;178612288;178612287 | chr2:179477016;179477015;179477014 |
N2B | 7681 | 23266;23267;23268 | chr2:178612289;178612288;178612287 | chr2:179477016;179477015;179477014 |
Novex-1 | 7806 | 23641;23642;23643 | chr2:178612289;178612288;178612287 | chr2:179477016;179477015;179477014 |
Novex-2 | 7873 | 23842;23843;23844 | chr2:178612289;178612288;178612287 | chr2:179477016;179477015;179477014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.999 | N | 0.734 | 0.354 | 0.359557344763 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
K/T | rs1367329297 | None | 0.999 | N | 0.649 | 0.506 | 0.438593652726 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs1367329297 | None | 0.999 | N | 0.649 | 0.506 | 0.438593652726 | gnomAD-4.0.0 | 2.0302E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.41009E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9144 | likely_pathogenic | 0.9005 | pathogenic | -0.431 | Destabilizing | 0.998 | D | 0.697 | prob.delet. | None | None | None | None | N |
K/C | 0.974 | likely_pathogenic | 0.9665 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.738 | deleterious | None | None | None | None | N |
K/D | 0.981 | likely_pathogenic | 0.9788 | pathogenic | 0.121 | Stabilizing | 0.999 | D | 0.693 | prob.delet. | None | None | None | None | N |
K/E | 0.8372 | likely_pathogenic | 0.7924 | pathogenic | 0.191 | Stabilizing | 0.997 | D | 0.681 | prob.neutral | N | 0.49126639 | None | None | N |
K/F | 0.993 | likely_pathogenic | 0.9903 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/G | 0.9431 | likely_pathogenic | 0.9347 | pathogenic | -0.742 | Destabilizing | 0.999 | D | 0.663 | prob.neutral | None | None | None | None | N |
K/H | 0.8561 | likely_pathogenic | 0.8079 | pathogenic | -1.094 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
K/I | 0.9287 | likely_pathogenic | 0.9207 | pathogenic | 0.344 | Stabilizing | 0.999 | D | 0.733 | deleterious | D | 0.595532764 | None | None | N |
K/L | 0.9127 | likely_pathogenic | 0.9033 | pathogenic | 0.344 | Stabilizing | 0.999 | D | 0.663 | prob.neutral | None | None | None | None | N |
K/M | 0.8708 | likely_pathogenic | 0.8391 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | N |
K/N | 0.956 | likely_pathogenic | 0.9522 | pathogenic | -0.208 | Destabilizing | 0.999 | D | 0.699 | prob.delet. | D | 0.656246272 | None | None | N |
K/P | 0.9844 | likely_pathogenic | 0.9842 | pathogenic | 0.116 | Stabilizing | 0.999 | D | 0.662 | prob.neutral | None | None | None | None | N |
K/Q | 0.6006 | likely_pathogenic | 0.5263 | ambiguous | -0.363 | Destabilizing | 0.999 | D | 0.734 | deleterious | N | 0.520237331 | None | None | N |
K/R | 0.1534 | likely_benign | 0.133 | benign | -0.421 | Destabilizing | 0.997 | D | 0.639 | neutral | N | 0.501282241 | None | None | N |
K/S | 0.9381 | likely_pathogenic | 0.9299 | pathogenic | -0.887 | Destabilizing | 0.998 | D | 0.731 | deleterious | None | None | None | None | N |
K/T | 0.7796 | likely_pathogenic | 0.7533 | pathogenic | -0.626 | Destabilizing | 0.999 | D | 0.649 | prob.neutral | N | 0.492135457 | None | None | N |
K/V | 0.8678 | likely_pathogenic | 0.8562 | pathogenic | 0.116 | Stabilizing | 0.999 | D | 0.69 | prob.delet. | None | None | None | None | N |
K/W | 0.9895 | likely_pathogenic | 0.9828 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
K/Y | 0.9811 | likely_pathogenic | 0.9737 | pathogenic | 0.126 | Stabilizing | 1.0 | D | 0.721 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.