Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16747 | 50464;50465;50466 | chr2:178612286;178612285;178612284 | chr2:179477013;179477012;179477011 |
N2AB | 15106 | 45541;45542;45543 | chr2:178612286;178612285;178612284 | chr2:179477013;179477012;179477011 |
N2A | 14179 | 42760;42761;42762 | chr2:178612286;178612285;178612284 | chr2:179477013;179477012;179477011 |
N2B | 7682 | 23269;23270;23271 | chr2:178612286;178612285;178612284 | chr2:179477013;179477012;179477011 |
Novex-1 | 7807 | 23644;23645;23646 | chr2:178612286;178612285;178612284 | chr2:179477013;179477012;179477011 |
Novex-2 | 7874 | 23845;23846;23847 | chr2:178612286;178612285;178612284 | chr2:179477013;179477012;179477011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs745559631 | -0.083 | 1.0 | D | 0.766 | 0.399 | 0.391000631824 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9083 | likely_pathogenic | 0.974 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.707 | prob.delet. | N | 0.496777116 | None | None | N |
D/C | 0.9895 | likely_pathogenic | 0.9968 | pathogenic | 0.121 | Stabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
D/E | 0.7557 | likely_pathogenic | 0.896 | pathogenic | -0.328 | Destabilizing | 0.999 | D | 0.439 | neutral | N | 0.493794379 | None | None | N |
D/F | 0.9903 | likely_pathogenic | 0.9972 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
D/G | 0.8201 | likely_pathogenic | 0.9462 | pathogenic | -0.373 | Destabilizing | 1.0 | D | 0.766 | deleterious | D | 0.524240019 | None | None | N |
D/H | 0.9643 | likely_pathogenic | 0.9881 | pathogenic | -0.084 | Destabilizing | 1.0 | D | 0.844 | deleterious | D | 0.565870176 | None | None | N |
D/I | 0.9818 | likely_pathogenic | 0.996 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
D/K | 0.9773 | likely_pathogenic | 0.9936 | pathogenic | 0.408 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
D/L | 0.9668 | likely_pathogenic | 0.9928 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
D/M | 0.9912 | likely_pathogenic | 0.9981 | pathogenic | 0.305 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
D/N | 0.563 | ambiguous | 0.7972 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.751 | deleterious | N | 0.502709338 | None | None | N |
D/P | 0.9766 | likely_pathogenic | 0.9943 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
D/Q | 0.9709 | likely_pathogenic | 0.9924 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
D/R | 0.9822 | likely_pathogenic | 0.9948 | pathogenic | 0.524 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/S | 0.7869 | likely_pathogenic | 0.9267 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
D/T | 0.9343 | likely_pathogenic | 0.9846 | pathogenic | 0.206 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
D/V | 0.9379 | likely_pathogenic | 0.9843 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.739 | deleterious | D | 0.554086724 | None | None | N |
D/W | 0.9976 | likely_pathogenic | 0.9993 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.738 | deleterious | None | None | None | None | N |
D/Y | 0.9122 | likely_pathogenic | 0.9734 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.762 | deleterious | N | 0.501479942 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.