Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16758 | 50497;50498;50499 | chr2:178612139;178612138;178612137 | chr2:179476866;179476865;179476864 |
N2AB | 15117 | 45574;45575;45576 | chr2:178612139;178612138;178612137 | chr2:179476866;179476865;179476864 |
N2A | 14190 | 42793;42794;42795 | chr2:178612139;178612138;178612137 | chr2:179476866;179476865;179476864 |
N2B | 7693 | 23302;23303;23304 | chr2:178612139;178612138;178612137 | chr2:179476866;179476865;179476864 |
Novex-1 | 7818 | 23677;23678;23679 | chr2:178612139;178612138;178612137 | chr2:179476866;179476865;179476864 |
Novex-2 | 7885 | 23878;23879;23880 | chr2:178612139;178612138;178612137 | chr2:179476866;179476865;179476864 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.877 | 0.617 | 0.839773394438 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9333 | likely_pathogenic | 0.919 | pathogenic | -2.35 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
L/C | 0.955 | likely_pathogenic | 0.9458 | pathogenic | -1.778 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -2.479 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/E | 0.9941 | likely_pathogenic | 0.9935 | pathogenic | -2.345 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
L/F | 0.8954 | likely_pathogenic | 0.8442 | pathogenic | -1.528 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/G | 0.9927 | likely_pathogenic | 0.9911 | pathogenic | -2.822 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/H | 0.9915 | likely_pathogenic | 0.9889 | pathogenic | -2.242 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/I | 0.335 | likely_benign | 0.3186 | benign | -1.031 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/K | 0.9892 | likely_pathogenic | 0.9873 | pathogenic | -1.721 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/M | 0.4997 | ambiguous | 0.4726 | ambiguous | -0.988 | Destabilizing | 1.0 | D | 0.788 | deleterious | D | 0.599224133 | None | None | N |
L/N | 0.993 | likely_pathogenic | 0.9913 | pathogenic | -1.829 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/P | 0.9379 | likely_pathogenic | 0.8731 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.491471759 | None | None | N |
L/Q | 0.9815 | likely_pathogenic | 0.9806 | pathogenic | -1.844 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.692943007 | None | None | N |
L/R | 0.9807 | likely_pathogenic | 0.9774 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.692943007 | None | None | N |
L/S | 0.9904 | likely_pathogenic | 0.989 | pathogenic | -2.506 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/T | 0.9209 | likely_pathogenic | 0.9223 | pathogenic | -2.237 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/V | 0.3007 | likely_benign | 0.2944 | benign | -1.447 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.473712219 | None | None | N |
L/W | 0.9899 | likely_pathogenic | 0.9861 | pathogenic | -1.813 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
L/Y | 0.9934 | likely_pathogenic | 0.9901 | pathogenic | -1.543 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.