Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16759 | 50500;50501;50502 | chr2:178612136;178612135;178612134 | chr2:179476863;179476862;179476861 |
N2AB | 15118 | 45577;45578;45579 | chr2:178612136;178612135;178612134 | chr2:179476863;179476862;179476861 |
N2A | 14191 | 42796;42797;42798 | chr2:178612136;178612135;178612134 | chr2:179476863;179476862;179476861 |
N2B | 7694 | 23305;23306;23307 | chr2:178612136;178612135;178612134 | chr2:179476863;179476862;179476861 |
Novex-1 | 7819 | 23680;23681;23682 | chr2:178612136;178612135;178612134 | chr2:179476863;179476862;179476861 |
Novex-2 | 7886 | 23881;23882;23883 | chr2:178612136;178612135;178612134 | chr2:179476863;179476862;179476861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1374450831 | -0.633 | None | N | 0.195 | 0.128 | 0.0716867268079 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.7E-05 | None | 0 | None | 0 | 0 | 0 |
A/T | rs1374450831 | -0.633 | None | N | 0.195 | 0.128 | 0.0716867268079 | gnomAD-4.0.0 | 1.37026E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.08053E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3668 | ambiguous | 0.3031 | benign | -0.726 | Destabilizing | 0.824 | D | 0.478 | neutral | None | None | None | None | N |
A/D | 0.3165 | likely_benign | 0.2715 | benign | -0.672 | Destabilizing | 0.149 | N | 0.571 | neutral | None | None | None | None | N |
A/E | 0.2108 | likely_benign | 0.1999 | benign | -0.717 | Destabilizing | 0.117 | N | 0.477 | neutral | N | 0.410240488 | None | None | N |
A/F | 0.3862 | ambiguous | 0.3106 | benign | -0.701 | Destabilizing | 0.555 | D | 0.611 | neutral | None | None | None | None | N |
A/G | 0.1747 | likely_benign | 0.1522 | benign | -0.758 | Destabilizing | 0.052 | N | 0.485 | neutral | N | 0.480387022 | None | None | N |
A/H | 0.3483 | ambiguous | 0.315 | benign | -0.874 | Destabilizing | 0.935 | D | 0.596 | neutral | None | None | None | None | N |
A/I | 0.2265 | likely_benign | 0.1785 | benign | -0.128 | Destabilizing | 0.235 | N | 0.537 | neutral | None | None | None | None | N |
A/K | 0.3566 | ambiguous | 0.3058 | benign | -1.003 | Destabilizing | 0.149 | N | 0.473 | neutral | None | None | None | None | N |
A/L | 0.1606 | likely_benign | 0.1323 | benign | -0.128 | Destabilizing | 0.081 | N | 0.471 | neutral | None | None | None | None | N |
A/M | 0.1596 | likely_benign | 0.1382 | benign | -0.243 | Destabilizing | 0.824 | D | 0.537 | neutral | None | None | None | None | N |
A/N | 0.1794 | likely_benign | 0.1574 | benign | -0.768 | Destabilizing | 0.149 | N | 0.596 | neutral | None | None | None | None | N |
A/P | 0.8823 | likely_pathogenic | 0.7883 | pathogenic | -0.226 | Destabilizing | 0.484 | N | 0.548 | neutral | N | 0.495361269 | None | None | N |
A/Q | 0.224 | likely_benign | 0.2154 | benign | -0.895 | Destabilizing | 0.555 | D | 0.542 | neutral | None | None | None | None | N |
A/R | 0.3186 | likely_benign | 0.285 | benign | -0.668 | Destabilizing | 0.38 | N | 0.549 | neutral | None | None | None | None | N |
A/S | 0.0794 | likely_benign | 0.0771 | benign | -1.07 | Destabilizing | 0.001 | N | 0.219 | neutral | N | 0.463693317 | None | None | N |
A/T | 0.0561 | likely_benign | 0.0541 | benign | -1.017 | Destabilizing | None | N | 0.195 | neutral | N | 0.369649096 | None | None | N |
A/V | 0.1152 | likely_benign | 0.0992 | benign | -0.226 | Destabilizing | 0.062 | N | 0.469 | neutral | N | 0.44968921 | None | None | N |
A/W | 0.7564 | likely_pathogenic | 0.6874 | pathogenic | -1.042 | Destabilizing | 0.935 | D | 0.704 | prob.neutral | None | None | None | None | N |
A/Y | 0.5026 | ambiguous | 0.4181 | ambiguous | -0.619 | Destabilizing | 0.555 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.