Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16760 | 50503;50504;50505 | chr2:178612133;178612132;178612131 | chr2:179476860;179476859;179476858 |
N2AB | 15119 | 45580;45581;45582 | chr2:178612133;178612132;178612131 | chr2:179476860;179476859;179476858 |
N2A | 14192 | 42799;42800;42801 | chr2:178612133;178612132;178612131 | chr2:179476860;179476859;179476858 |
N2B | 7695 | 23308;23309;23310 | chr2:178612133;178612132;178612131 | chr2:179476860;179476859;179476858 |
Novex-1 | 7820 | 23683;23684;23685 | chr2:178612133;178612132;178612131 | chr2:179476860;179476859;179476858 |
Novex-2 | 7887 | 23884;23885;23886 | chr2:178612133;178612132;178612131 | chr2:179476860;179476859;179476858 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs772739731 | -0.375 | 0.968 | D | 0.579 | 0.419 | 0.617871938043 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
V/M | rs772739731 | -0.375 | 0.968 | D | 0.579 | 0.419 | 0.617871938043 | gnomAD-4.0.0 | 1.59599E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86474E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4553 | ambiguous | 0.4533 | ambiguous | -1.311 | Destabilizing | 0.896 | D | 0.523 | neutral | N | 0.482396642 | None | None | N |
V/C | 0.9263 | likely_pathogenic | 0.9185 | pathogenic | -1.119 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/D | 0.9568 | likely_pathogenic | 0.9641 | pathogenic | -1.025 | Destabilizing | 0.988 | D | 0.757 | deleterious | None | None | None | None | N |
V/E | 0.896 | likely_pathogenic | 0.9082 | pathogenic | -0.97 | Destabilizing | 0.968 | D | 0.725 | prob.delet. | D | 0.631444545 | None | None | N |
V/F | 0.5901 | likely_pathogenic | 0.5932 | pathogenic | -0.844 | Destabilizing | 0.976 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/G | 0.795 | likely_pathogenic | 0.8103 | pathogenic | -1.662 | Destabilizing | 0.968 | D | 0.724 | prob.delet. | D | 0.589449734 | None | None | N |
V/H | 0.9689 | likely_pathogenic | 0.9738 | pathogenic | -1.025 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
V/I | 0.0863 | likely_benign | 0.08 | benign | -0.431 | Destabilizing | 0.034 | N | 0.231 | neutral | None | None | None | None | N |
V/K | 0.9043 | likely_pathogenic | 0.9136 | pathogenic | -1.189 | Destabilizing | 0.976 | D | 0.726 | prob.delet. | None | None | None | None | N |
V/L | 0.4406 | ambiguous | 0.4301 | ambiguous | -0.431 | Destabilizing | 0.64 | D | 0.463 | neutral | N | 0.486607407 | None | None | N |
V/M | 0.3531 | ambiguous | 0.3436 | ambiguous | -0.535 | Destabilizing | 0.968 | D | 0.579 | neutral | D | 0.589751528 | None | None | N |
V/N | 0.8933 | likely_pathogenic | 0.9065 | pathogenic | -1.198 | Destabilizing | 0.988 | D | 0.768 | deleterious | None | None | None | None | N |
V/P | 0.7961 | likely_pathogenic | 0.8075 | pathogenic | -0.69 | Destabilizing | 0.076 | N | 0.412 | neutral | None | None | None | None | N |
V/Q | 0.8945 | likely_pathogenic | 0.9049 | pathogenic | -1.234 | Destabilizing | 0.988 | D | 0.747 | deleterious | None | None | None | None | N |
V/R | 0.8949 | likely_pathogenic | 0.9066 | pathogenic | -0.771 | Destabilizing | 0.988 | D | 0.775 | deleterious | None | None | None | None | N |
V/S | 0.7578 | likely_pathogenic | 0.7733 | pathogenic | -1.753 | Destabilizing | 0.976 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/T | 0.5121 | ambiguous | 0.5188 | ambiguous | -1.562 | Destabilizing | 0.919 | D | 0.571 | neutral | None | None | None | None | N |
V/W | 0.9844 | likely_pathogenic | 0.9852 | pathogenic | -1.051 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/Y | 0.9467 | likely_pathogenic | 0.9508 | pathogenic | -0.732 | Destabilizing | 0.996 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.