Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16763 | 50512;50513;50514 | chr2:178612124;178612123;178612122 | chr2:179476851;179476850;179476849 |
N2AB | 15122 | 45589;45590;45591 | chr2:178612124;178612123;178612122 | chr2:179476851;179476850;179476849 |
N2A | 14195 | 42808;42809;42810 | chr2:178612124;178612123;178612122 | chr2:179476851;179476850;179476849 |
N2B | 7698 | 23317;23318;23319 | chr2:178612124;178612123;178612122 | chr2:179476851;179476850;179476849 |
Novex-1 | 7823 | 23692;23693;23694 | chr2:178612124;178612123;178612122 | chr2:179476851;179476850;179476849 |
Novex-2 | 7890 | 23893;23894;23895 | chr2:178612124;178612123;178612122 | chr2:179476851;179476850;179476849 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs927015538 | -0.876 | 1.0 | D | 0.695 | 0.41 | 0.666881549798 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs927015538 | -0.876 | 1.0 | D | 0.695 | 0.41 | 0.666881549798 | gnomAD-4.0.0 | 3.1909E-06 | None | None | None | None | N | None | 0 | 4.58905E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5319 | ambiguous | 0.4619 | ambiguous | -1.749 | Destabilizing | 0.999 | D | 0.533 | neutral | N | 0.478892311 | None | None | N |
V/C | 0.8754 | likely_pathogenic | 0.8409 | pathogenic | -1.448 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
V/D | 0.9138 | likely_pathogenic | 0.8807 | pathogenic | -2.652 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/E | 0.7997 | likely_pathogenic | 0.7602 | pathogenic | -2.587 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.678021652 | None | None | N |
V/F | 0.4751 | ambiguous | 0.4137 | ambiguous | -1.301 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/G | 0.7016 | likely_pathogenic | 0.63 | pathogenic | -2.139 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.619925979 | None | None | N |
V/H | 0.9138 | likely_pathogenic | 0.8752 | pathogenic | -1.948 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/I | 0.0981 | likely_benign | 0.0903 | benign | -0.726 | Destabilizing | 0.998 | D | 0.493 | neutral | None | None | None | None | N |
V/K | 0.707 | likely_pathogenic | 0.6499 | pathogenic | -1.563 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
V/L | 0.4951 | ambiguous | 0.4546 | ambiguous | -0.726 | Destabilizing | 0.997 | D | 0.521 | neutral | N | 0.474500919 | None | None | N |
V/M | 0.3097 | likely_benign | 0.2614 | benign | -0.616 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.589177341 | None | None | N |
V/N | 0.8019 | likely_pathogenic | 0.7205 | pathogenic | -1.588 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/P | 0.9795 | likely_pathogenic | 0.977 | pathogenic | -1.036 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/Q | 0.7378 | likely_pathogenic | 0.6846 | pathogenic | -1.677 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.6949 | likely_pathogenic | 0.6406 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/S | 0.681 | likely_pathogenic | 0.5938 | pathogenic | -2.025 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
V/T | 0.4372 | ambiguous | 0.3378 | benign | -1.851 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
V/W | 0.9715 | likely_pathogenic | 0.9622 | pathogenic | -1.731 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
V/Y | 0.8769 | likely_pathogenic | 0.8417 | pathogenic | -1.399 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.