Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16765 | 50518;50519;50520 | chr2:178612118;178612117;178612116 | chr2:179476845;179476844;179476843 |
N2AB | 15124 | 45595;45596;45597 | chr2:178612118;178612117;178612116 | chr2:179476845;179476844;179476843 |
N2A | 14197 | 42814;42815;42816 | chr2:178612118;178612117;178612116 | chr2:179476845;179476844;179476843 |
N2B | 7700 | 23323;23324;23325 | chr2:178612118;178612117;178612116 | chr2:179476845;179476844;179476843 |
Novex-1 | 7825 | 23698;23699;23700 | chr2:178612118;178612117;178612116 | chr2:179476845;179476844;179476843 |
Novex-2 | 7892 | 23899;23900;23901 | chr2:178612118;178612117;178612116 | chr2:179476845;179476844;179476843 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1173417812 | None | 1.0 | N | 0.729 | 0.361 | 0.276065633971 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs1173417812 | None | 1.0 | N | 0.729 | 0.361 | 0.276065633971 | gnomAD-4.0.0 | 2.03025E-06 | None | None | None | None | N | None | 3.49589E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7518 | likely_pathogenic | 0.7808 | pathogenic | -0.288 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
K/C | 0.9408 | likely_pathogenic | 0.9211 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/D | 0.9142 | likely_pathogenic | 0.934 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/E | 0.6242 | likely_pathogenic | 0.681 | pathogenic | -0.158 | Destabilizing | 0.999 | D | 0.585 | neutral | N | 0.475548586 | None | None | N |
K/F | 0.9843 | likely_pathogenic | 0.9844 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/G | 0.7968 | likely_pathogenic | 0.8179 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/H | 0.7332 | likely_pathogenic | 0.738 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
K/I | 0.8901 | likely_pathogenic | 0.9069 | pathogenic | 0.453 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | D | 0.542839954 | None | None | N |
K/L | 0.8055 | likely_pathogenic | 0.8306 | pathogenic | 0.453 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/M | 0.7654 | likely_pathogenic | 0.7869 | pathogenic | 0.376 | Stabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
K/N | 0.8576 | likely_pathogenic | 0.8774 | pathogenic | -0.216 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.463395093 | None | None | N |
K/P | 0.8055 | likely_pathogenic | 0.8229 | pathogenic | 0.236 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/Q | 0.3824 | ambiguous | 0.4117 | ambiguous | -0.405 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.471622872 | None | None | N |
K/R | 0.1087 | likely_benign | 0.1096 | benign | -0.458 | Destabilizing | 0.999 | D | 0.534 | neutral | N | 0.473500229 | None | None | N |
K/S | 0.7742 | likely_pathogenic | 0.8038 | pathogenic | -0.768 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/T | 0.6635 | likely_pathogenic | 0.6985 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | D | 0.536397241 | None | None | N |
K/V | 0.8345 | likely_pathogenic | 0.8488 | pathogenic | 0.236 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/W | 0.9696 | likely_pathogenic | 0.9702 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/Y | 0.949 | likely_pathogenic | 0.9492 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.