Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16781 | 50566;50567;50568 | chr2:178612070;178612069;178612068 | chr2:179476797;179476796;179476795 |
N2AB | 15140 | 45643;45644;45645 | chr2:178612070;178612069;178612068 | chr2:179476797;179476796;179476795 |
N2A | 14213 | 42862;42863;42864 | chr2:178612070;178612069;178612068 | chr2:179476797;179476796;179476795 |
N2B | 7716 | 23371;23372;23373 | chr2:178612070;178612069;178612068 | chr2:179476797;179476796;179476795 |
Novex-1 | 7841 | 23746;23747;23748 | chr2:178612070;178612069;178612068 | chr2:179476797;179476796;179476795 |
Novex-2 | 7908 | 23947;23948;23949 | chr2:178612070;178612069;178612068 | chr2:179476797;179476796;179476795 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs764363428 | -0.708 | 0.014 | N | 0.379 | 0.097 | 0.240491677333 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.02E-06 | 0 |
R/K | rs764363428 | -0.708 | 0.014 | N | 0.379 | 0.097 | 0.240491677333 | gnomAD-4.0.0 | 1.59878E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86812E-06 | 0 | 0 |
R/T | None | None | 0.942 | N | 0.632 | 0.324 | 0.33340067248 | gnomAD-4.0.0 | 1.59878E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86812E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8103 | likely_pathogenic | 0.8521 | pathogenic | -0.089 | Destabilizing | 0.754 | D | 0.603 | neutral | None | None | None | None | I |
R/C | 0.3759 | ambiguous | 0.4423 | ambiguous | -0.067 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | I |
R/D | 0.9706 | likely_pathogenic | 0.9818 | pathogenic | -0.029 | Destabilizing | 0.956 | D | 0.69 | prob.neutral | None | None | None | None | I |
R/E | 0.855 | likely_pathogenic | 0.897 | pathogenic | 0.042 | Stabilizing | 0.754 | D | 0.631 | neutral | None | None | None | None | I |
R/F | 0.8502 | likely_pathogenic | 0.9028 | pathogenic | -0.234 | Destabilizing | 0.993 | D | 0.737 | prob.delet. | None | None | None | None | I |
R/G | 0.7109 | likely_pathogenic | 0.7658 | pathogenic | -0.315 | Destabilizing | 0.822 | D | 0.654 | neutral | N | 0.454010384 | None | None | I |
R/H | 0.2393 | likely_benign | 0.3129 | benign | -0.812 | Destabilizing | 0.978 | D | 0.657 | neutral | None | None | None | None | I |
R/I | 0.7266 | likely_pathogenic | 0.8162 | pathogenic | 0.48 | Stabilizing | 0.971 | D | 0.739 | prob.delet. | N | 0.474985199 | None | None | I |
R/K | 0.1376 | likely_benign | 0.1304 | benign | -0.1 | Destabilizing | 0.014 | N | 0.379 | neutral | N | 0.482754917 | None | None | I |
R/L | 0.551 | ambiguous | 0.6526 | pathogenic | 0.48 | Stabilizing | 0.86 | D | 0.654 | neutral | None | None | None | None | I |
R/M | 0.6447 | likely_pathogenic | 0.7355 | pathogenic | 0.127 | Stabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | I |
R/N | 0.8982 | likely_pathogenic | 0.9307 | pathogenic | 0.283 | Stabilizing | 0.956 | D | 0.677 | prob.neutral | None | None | None | None | I |
R/P | 0.9839 | likely_pathogenic | 0.9895 | pathogenic | 0.312 | Stabilizing | 0.978 | D | 0.709 | prob.delet. | None | None | None | None | I |
R/Q | 0.2257 | likely_benign | 0.277 | benign | 0.127 | Stabilizing | 0.956 | D | 0.691 | prob.neutral | None | None | None | None | I |
R/S | 0.8499 | likely_pathogenic | 0.9009 | pathogenic | -0.158 | Destabilizing | 0.822 | D | 0.665 | neutral | N | 0.41550835 | None | None | I |
R/T | 0.7819 | likely_pathogenic | 0.8654 | pathogenic | 0.057 | Stabilizing | 0.942 | D | 0.632 | neutral | N | 0.462085407 | None | None | I |
R/V | 0.7765 | likely_pathogenic | 0.844 | pathogenic | 0.312 | Stabilizing | 0.956 | D | 0.729 | prob.delet. | None | None | None | None | I |
R/W | 0.594 | likely_pathogenic | 0.685 | pathogenic | -0.197 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | I |
R/Y | 0.7572 | likely_pathogenic | 0.8222 | pathogenic | 0.194 | Stabilizing | 0.993 | D | 0.711 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.