Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16785 | 50578;50579;50580 | chr2:178612058;178612057;178611954 | chr2:179476785;179476784;179476681 |
N2AB | 15144 | 45655;45656;45657 | chr2:178612058;178612057;178611954 | chr2:179476785;179476784;179476681 |
N2A | 14217 | 42874;42875;42876 | chr2:178612058;178612057;178611954 | chr2:179476785;179476784;179476681 |
N2B | 7720 | 23383;23384;23385 | chr2:178612058;178612057;178611954 | chr2:179476785;179476784;179476681 |
Novex-1 | 7845 | 23758;23759;23760 | chr2:178612058;178612057;178611954 | chr2:179476785;179476784;179476681 |
Novex-2 | 7912 | 23959;23960;23961 | chr2:178612058;178612057;178611954 | chr2:179476785;179476784;179476681 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.543 | N | 0.226 | 0.187 | 0.263140351381 | gnomAD-4.0.0 | 6.86944E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01157E-07 | 0 | 0 |
R/T | rs1363740118 | None | 0.998 | N | 0.697 | 0.331 | 0.410734915765 | gnomAD-4.0.0 | 6.86944E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01157E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6772 | likely_pathogenic | 0.5983 | pathogenic | -1.255 | Destabilizing | 0.992 | D | 0.533 | neutral | None | None | None | None | N |
R/C | 0.2578 | likely_benign | 0.1912 | benign | -1.256 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
R/D | 0.8888 | likely_pathogenic | 0.8589 | pathogenic | -0.298 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
R/E | 0.7147 | likely_pathogenic | 0.6492 | pathogenic | -0.163 | Destabilizing | 0.992 | D | 0.437 | neutral | None | None | None | None | N |
R/F | 0.8294 | likely_pathogenic | 0.7622 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
R/G | 0.3831 | ambiguous | 0.2967 | benign | -1.575 | Destabilizing | 0.994 | D | 0.639 | neutral | N | 0.3887394 | None | None | N |
R/H | 0.1491 | likely_benign | 0.1199 | benign | -1.635 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | N |
R/I | 0.6629 | likely_pathogenic | 0.6468 | pathogenic | -0.377 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.484196667 | None | None | N |
R/K | 0.1462 | likely_benign | 0.1128 | benign | -1.263 | Destabilizing | 0.543 | D | 0.226 | neutral | N | 0.434093168 | None | None | N |
R/L | 0.5718 | likely_pathogenic | 0.4926 | ambiguous | -0.377 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | N |
R/M | 0.5826 | likely_pathogenic | 0.5064 | ambiguous | -0.641 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
R/N | 0.709 | likely_pathogenic | 0.6501 | pathogenic | -0.684 | Destabilizing | 0.999 | D | 0.572 | neutral | None | None | None | None | N |
R/P | 0.9868 | likely_pathogenic | 0.9799 | pathogenic | -0.651 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/Q | 0.1789 | likely_benign | 0.1435 | benign | -0.879 | Destabilizing | 0.998 | D | 0.559 | neutral | None | None | None | None | N |
R/S | 0.6708 | likely_pathogenic | 0.592 | pathogenic | -1.593 | Destabilizing | 0.989 | D | 0.633 | neutral | N | 0.41181798 | None | None | N |
R/T | 0.5206 | ambiguous | 0.466 | ambiguous | -1.269 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | N | 0.475108175 | None | None | N |
R/V | 0.7192 | likely_pathogenic | 0.6773 | pathogenic | -0.651 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
R/W | 0.4569 | ambiguous | 0.3741 | ambiguous | -0.542 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
R/Y | 0.6028 | likely_pathogenic | 0.5241 | ambiguous | -0.291 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.