Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16787 | 50584;50585;50586 | chr2:178611950;178611949;178611948 | chr2:179476677;179476676;179476675 |
N2AB | 15146 | 45661;45662;45663 | chr2:178611950;178611949;178611948 | chr2:179476677;179476676;179476675 |
N2A | 14219 | 42880;42881;42882 | chr2:178611950;178611949;178611948 | chr2:179476677;179476676;179476675 |
N2B | 7722 | 23389;23390;23391 | chr2:178611950;178611949;178611948 | chr2:179476677;179476676;179476675 |
Novex-1 | 7847 | 23764;23765;23766 | chr2:178611950;178611949;178611948 | chr2:179476677;179476676;179476675 |
Novex-2 | 7914 | 23965;23966;23967 | chr2:178611950;178611949;178611948 | chr2:179476677;179476676;179476675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1419766789 | -0.611 | 0.009 | N | 0.551 | 0.095 | 0.130388298395 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs1419766789 | -0.611 | 0.009 | N | 0.551 | 0.095 | 0.130388298395 | gnomAD-4.0.0 | 6.58033E-06 | None | None | None | None | N | None | 2.41429E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3965 | ambiguous | 0.4652 | ambiguous | -2.445 | Highly Destabilizing | 0.027 | N | 0.608 | neutral | N | 0.496698461 | None | None | N |
V/C | 0.7388 | likely_pathogenic | 0.7413 | pathogenic | -1.783 | Destabilizing | 0.935 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/D | 0.7081 | likely_pathogenic | 0.7986 | pathogenic | -3.126 | Highly Destabilizing | 0.317 | N | 0.738 | prob.delet. | N | 0.469875785 | None | None | N |
V/E | 0.604 | likely_pathogenic | 0.6883 | pathogenic | -2.94 | Highly Destabilizing | 0.149 | N | 0.693 | prob.neutral | None | None | None | None | N |
V/F | 0.2244 | likely_benign | 0.2463 | benign | -1.473 | Destabilizing | 0.317 | N | 0.719 | prob.delet. | N | 0.48081517 | None | None | N |
V/G | 0.5675 | likely_pathogenic | 0.6413 | pathogenic | -2.926 | Highly Destabilizing | 0.117 | N | 0.707 | prob.neutral | D | 0.573437653 | None | None | N |
V/H | 0.668 | likely_pathogenic | 0.7279 | pathogenic | -2.563 | Highly Destabilizing | 0.935 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/I | 0.0606 | likely_benign | 0.0583 | benign | -1.097 | Destabilizing | None | N | 0.241 | neutral | N | 0.430451734 | None | None | N |
V/K | 0.7493 | likely_pathogenic | 0.7773 | pathogenic | -2.19 | Highly Destabilizing | 0.38 | N | 0.691 | prob.neutral | None | None | None | None | N |
V/L | 0.187 | likely_benign | 0.191 | benign | -1.097 | Destabilizing | 0.009 | N | 0.551 | neutral | N | 0.472080547 | None | None | N |
V/M | 0.182 | likely_benign | 0.1878 | benign | -1.007 | Destabilizing | 0.38 | N | 0.695 | prob.neutral | None | None | None | None | N |
V/N | 0.3924 | ambiguous | 0.4732 | ambiguous | -2.409 | Highly Destabilizing | 0.38 | N | 0.727 | prob.delet. | None | None | None | None | N |
V/P | 0.9841 | likely_pathogenic | 0.9841 | pathogenic | -1.523 | Destabilizing | 0.555 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/Q | 0.5648 | likely_pathogenic | 0.6302 | pathogenic | -2.323 | Highly Destabilizing | 0.555 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/R | 0.6386 | likely_pathogenic | 0.6834 | pathogenic | -1.802 | Destabilizing | 0.555 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/S | 0.3463 | ambiguous | 0.4163 | ambiguous | -2.96 | Highly Destabilizing | 0.007 | N | 0.507 | neutral | None | None | None | None | N |
V/T | 0.2663 | likely_benign | 0.3165 | benign | -2.662 | Highly Destabilizing | 0.081 | N | 0.673 | neutral | None | None | None | None | N |
V/W | 0.8756 | likely_pathogenic | 0.8926 | pathogenic | -1.994 | Destabilizing | 0.935 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/Y | 0.6268 | likely_pathogenic | 0.6432 | pathogenic | -1.701 | Destabilizing | 0.555 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.