Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16795 | 50608;50609;50610 | chr2:178611926;178611925;178611924 | chr2:179476653;179476652;179476651 |
N2AB | 15154 | 45685;45686;45687 | chr2:178611926;178611925;178611924 | chr2:179476653;179476652;179476651 |
N2A | 14227 | 42904;42905;42906 | chr2:178611926;178611925;178611924 | chr2:179476653;179476652;179476651 |
N2B | 7730 | 23413;23414;23415 | chr2:178611926;178611925;178611924 | chr2:179476653;179476652;179476651 |
Novex-1 | 7855 | 23788;23789;23790 | chr2:178611926;178611925;178611924 | chr2:179476653;179476652;179476651 |
Novex-2 | 7922 | 23989;23990;23991 | chr2:178611926;178611925;178611924 | chr2:179476653;179476652;179476651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | 0.997 | N | 0.711 | 0.4 | 0.75671349718 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2658 | likely_benign | 0.2473 | benign | -0.296 | Destabilizing | 0.604 | D | 0.477 | neutral | N | 0.484797714 | None | None | N |
G/C | 0.7158 | likely_pathogenic | 0.6553 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.580664181 | None | None | N |
G/D | 0.8564 | likely_pathogenic | 0.8249 | pathogenic | -0.649 | Destabilizing | 0.999 | D | 0.654 | neutral | N | 0.481183614 | None | None | N |
G/E | 0.8612 | likely_pathogenic | 0.8142 | pathogenic | -0.813 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/F | 0.9502 | likely_pathogenic | 0.9367 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
G/H | 0.9184 | likely_pathogenic | 0.8964 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
G/I | 0.8821 | likely_pathogenic | 0.8684 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
G/K | 0.9634 | likely_pathogenic | 0.9444 | pathogenic | -0.872 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/L | 0.851 | likely_pathogenic | 0.8309 | pathogenic | -0.471 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/M | 0.8986 | likely_pathogenic | 0.8808 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
G/N | 0.7577 | likely_pathogenic | 0.7419 | pathogenic | -0.523 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
G/P | 0.978 | likely_pathogenic | 0.9815 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
G/Q | 0.8678 | likely_pathogenic | 0.8233 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
G/R | 0.9216 | likely_pathogenic | 0.8952 | pathogenic | -0.401 | Destabilizing | 0.999 | D | 0.744 | deleterious | N | 0.484593998 | None | None | N |
G/S | 0.2807 | likely_benign | 0.2515 | benign | -0.653 | Destabilizing | 0.997 | D | 0.603 | neutral | N | 0.444451443 | None | None | N |
G/T | 0.599 | likely_pathogenic | 0.5537 | ambiguous | -0.749 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
G/V | 0.7623 | likely_pathogenic | 0.7227 | pathogenic | -0.382 | Destabilizing | 0.997 | D | 0.711 | prob.delet. | N | 0.478394945 | None | None | N |
G/W | 0.9451 | likely_pathogenic | 0.9254 | pathogenic | -1.145 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/Y | 0.9439 | likely_pathogenic | 0.9285 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.