Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16803 | 50632;50633;50634 | chr2:178611902;178611901;178611900 | chr2:179476629;179476628;179476627 |
N2AB | 15162 | 45709;45710;45711 | chr2:178611902;178611901;178611900 | chr2:179476629;179476628;179476627 |
N2A | 14235 | 42928;42929;42930 | chr2:178611902;178611901;178611900 | chr2:179476629;179476628;179476627 |
N2B | 7738 | 23437;23438;23439 | chr2:178611902;178611901;178611900 | chr2:179476629;179476628;179476627 |
Novex-1 | 7863 | 23812;23813;23814 | chr2:178611902;178611901;178611900 | chr2:179476629;179476628;179476627 |
Novex-2 | 7930 | 24013;24014;24015 | chr2:178611902;178611901;178611900 | chr2:179476629;179476628;179476627 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.993 | N | 0.701 | 0.318 | 0.282575091529 | gnomAD-4.0.0 | 6.84645E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99831E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.759 | likely_pathogenic | 0.7801 | pathogenic | -0.495 | Destabilizing | 0.983 | D | 0.596 | neutral | None | None | None | None | N |
K/C | 0.8751 | likely_pathogenic | 0.8629 | pathogenic | -0.61 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/D | 0.9116 | likely_pathogenic | 0.9234 | pathogenic | 0.349 | Stabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/E | 0.568 | likely_pathogenic | 0.5939 | pathogenic | 0.462 | Stabilizing | 0.977 | D | 0.611 | neutral | N | 0.470655594 | None | None | N |
K/F | 0.9211 | likely_pathogenic | 0.9202 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/G | 0.8265 | likely_pathogenic | 0.8386 | pathogenic | -0.827 | Destabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | N |
K/H | 0.5761 | likely_pathogenic | 0.5573 | ambiguous | -0.921 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/I | 0.6191 | likely_pathogenic | 0.6544 | pathogenic | 0.353 | Stabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/L | 0.6858 | likely_pathogenic | 0.6877 | pathogenic | 0.353 | Stabilizing | 0.995 | D | 0.575 | neutral | None | None | None | None | N |
K/M | 0.5243 | ambiguous | 0.5486 | ambiguous | 0.019 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.524987518 | None | None | N |
K/N | 0.7849 | likely_pathogenic | 0.8168 | pathogenic | -0.25 | Destabilizing | 0.993 | D | 0.701 | prob.neutral | N | 0.469143398 | None | None | N |
K/P | 0.9427 | likely_pathogenic | 0.9381 | pathogenic | 0.1 | Stabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
K/Q | 0.3271 | likely_benign | 0.314 | benign | -0.264 | Destabilizing | 0.993 | D | 0.702 | prob.neutral | N | 0.481364509 | None | None | N |
K/R | 0.0953 | likely_benign | 0.093 | benign | -0.289 | Destabilizing | 0.235 | N | 0.348 | neutral | N | 0.479546899 | None | None | N |
K/S | 0.7767 | likely_pathogenic | 0.8102 | pathogenic | -0.956 | Destabilizing | 0.983 | D | 0.621 | neutral | None | None | None | None | N |
K/T | 0.4689 | ambiguous | 0.5262 | ambiguous | -0.634 | Destabilizing | 0.993 | D | 0.649 | neutral | N | 0.475720965 | None | None | N |
K/V | 0.5824 | likely_pathogenic | 0.6102 | pathogenic | 0.1 | Stabilizing | 0.998 | D | 0.65 | neutral | None | None | None | None | N |
K/W | 0.9048 | likely_pathogenic | 0.8839 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
K/Y | 0.8418 | likely_pathogenic | 0.8423 | pathogenic | 0.181 | Stabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.