Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16808 | 50647;50648;50649 | chr2:178611887;178611886;178611885 | chr2:179476614;179476613;179476612 |
N2AB | 15167 | 45724;45725;45726 | chr2:178611887;178611886;178611885 | chr2:179476614;179476613;179476612 |
N2A | 14240 | 42943;42944;42945 | chr2:178611887;178611886;178611885 | chr2:179476614;179476613;179476612 |
N2B | 7743 | 23452;23453;23454 | chr2:178611887;178611886;178611885 | chr2:179476614;179476613;179476612 |
Novex-1 | 7868 | 23827;23828;23829 | chr2:178611887;178611886;178611885 | chr2:179476614;179476613;179476612 |
Novex-2 | 7935 | 24028;24029;24030 | chr2:178611887;178611886;178611885 | chr2:179476614;179476613;179476612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.999 | N | 0.66 | 0.291 | 0.394837016283 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2806 | likely_benign | 0.2034 | benign | -0.363 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.481373009 | None | None | I |
D/C | 0.8314 | likely_pathogenic | 0.7406 | pathogenic | -0.034 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
D/E | 0.2059 | likely_benign | 0.1711 | benign | -0.444 | Destabilizing | 0.767 | D | 0.274 | neutral | N | 0.466182362 | None | None | I |
D/F | 0.7906 | likely_pathogenic | 0.6912 | pathogenic | -0.257 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
D/G | 0.3555 | ambiguous | 0.2505 | benign | -0.599 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | N | 0.482432455 | None | None | I |
D/H | 0.535 | ambiguous | 0.4142 | ambiguous | -0.263 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.468217259 | None | None | I |
D/I | 0.5274 | ambiguous | 0.4165 | ambiguous | 0.221 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
D/K | 0.6369 | likely_pathogenic | 0.5136 | ambiguous | 0.054 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/L | 0.5664 | likely_pathogenic | 0.4642 | ambiguous | 0.221 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
D/M | 0.8056 | likely_pathogenic | 0.718 | pathogenic | 0.43 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
D/N | 0.1504 | likely_benign | 0.1163 | benign | -0.223 | Destabilizing | 0.999 | D | 0.66 | neutral | N | 0.478369469 | None | None | I |
D/P | 0.8782 | likely_pathogenic | 0.8252 | pathogenic | 0.05 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
D/Q | 0.5219 | ambiguous | 0.4187 | ambiguous | -0.17 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/R | 0.6946 | likely_pathogenic | 0.5812 | pathogenic | 0.232 | Stabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | I |
D/S | 0.2062 | likely_benign | 0.1522 | benign | -0.359 | Destabilizing | 0.997 | D | 0.653 | neutral | None | None | None | None | I |
D/T | 0.3852 | ambiguous | 0.2951 | benign | -0.178 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
D/V | 0.3267 | likely_benign | 0.2459 | benign | 0.05 | Stabilizing | 0.999 | D | 0.747 | deleterious | N | 0.481367287 | None | None | I |
D/W | 0.9715 | likely_pathogenic | 0.9525 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
D/Y | 0.4564 | ambiguous | 0.3556 | ambiguous | -0.028 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.492565797 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.