Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16813 | 50662;50663;50664 | chr2:178611872;178611871;178611870 | chr2:179476599;179476598;179476597 |
N2AB | 15172 | 45739;45740;45741 | chr2:178611872;178611871;178611870 | chr2:179476599;179476598;179476597 |
N2A | 14245 | 42958;42959;42960 | chr2:178611872;178611871;178611870 | chr2:179476599;179476598;179476597 |
N2B | 7748 | 23467;23468;23469 | chr2:178611872;178611871;178611870 | chr2:179476599;179476598;179476597 |
Novex-1 | 7873 | 23842;23843;23844 | chr2:178611872;178611871;178611870 | chr2:179476599;179476598;179476597 |
Novex-2 | 7940 | 24043;24044;24045 | chr2:178611872;178611871;178611870 | chr2:179476599;179476598;179476597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.997 | N | 0.538 | 0.281 | 0.618934792644 | gnomAD-4.0.0 | 1.36912E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99802E-07 | 0 | 1.65777E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9106 | likely_pathogenic | 0.9293 | pathogenic | -1.933 | Destabilizing | 0.999 | D | 0.635 | neutral | D | 0.531670492 | None | None | N |
V/C | 0.9651 | likely_pathogenic | 0.9635 | pathogenic | -1.424 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/D | 0.9958 | likely_pathogenic | 0.9979 | pathogenic | -2.779 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/E | 0.9841 | likely_pathogenic | 0.9905 | pathogenic | -2.491 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.721360654 | None | None | N |
V/F | 0.8618 | likely_pathogenic | 0.8662 | pathogenic | -1.138 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
V/G | 0.9545 | likely_pathogenic | 0.9726 | pathogenic | -2.53 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.721360654 | None | None | N |
V/H | 0.9957 | likely_pathogenic | 0.9971 | pathogenic | -2.431 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.1482 | likely_benign | 0.1335 | benign | -0.232 | Destabilizing | 0.997 | D | 0.538 | neutral | N | 0.483417631 | None | None | N |
V/K | 0.9895 | likely_pathogenic | 0.994 | pathogenic | -1.634 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/L | 0.6993 | likely_pathogenic | 0.6795 | pathogenic | -0.232 | Destabilizing | 0.997 | D | 0.651 | neutral | N | 0.473152362 | None | None | N |
V/M | 0.7175 | likely_pathogenic | 0.6636 | pathogenic | -0.33 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/N | 0.9885 | likely_pathogenic | 0.9927 | pathogenic | -2.177 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/P | 0.9943 | likely_pathogenic | 0.9964 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/Q | 0.9849 | likely_pathogenic | 0.9901 | pathogenic | -1.886 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/R | 0.985 | likely_pathogenic | 0.9916 | pathogenic | -1.704 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/S | 0.9754 | likely_pathogenic | 0.9844 | pathogenic | -2.759 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/T | 0.9549 | likely_pathogenic | 0.965 | pathogenic | -2.303 | Highly Destabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
V/W | 0.9973 | likely_pathogenic | 0.9979 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/Y | 0.985 | likely_pathogenic | 0.9887 | pathogenic | -1.273 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.