Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16817 | 50674;50675;50676 | chr2:178611860;178611859;178611858 | chr2:179476587;179476586;179476585 |
N2AB | 15176 | 45751;45752;45753 | chr2:178611860;178611859;178611858 | chr2:179476587;179476586;179476585 |
N2A | 14249 | 42970;42971;42972 | chr2:178611860;178611859;178611858 | chr2:179476587;179476586;179476585 |
N2B | 7752 | 23479;23480;23481 | chr2:178611860;178611859;178611858 | chr2:179476587;179476586;179476585 |
Novex-1 | 7877 | 23854;23855;23856 | chr2:178611860;178611859;178611858 | chr2:179476587;179476586;179476585 |
Novex-2 | 7944 | 24055;24056;24057 | chr2:178611860;178611859;178611858 | chr2:179476587;179476586;179476585 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs2056387870 | None | 1.0 | N | 0.641 | 0.253 | 0.448597761117 | gnomAD-4.0.0 | 3.18618E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72298E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5014 | ambiguous | 0.5179 | ambiguous | -0.628 | Destabilizing | 0.999 | D | 0.457 | neutral | None | None | None | None | N |
I/C | 0.929 | likely_pathogenic | 0.903 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
I/D | 0.8301 | likely_pathogenic | 0.8542 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
I/E | 0.7255 | likely_pathogenic | 0.7564 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
I/F | 0.3616 | ambiguous | 0.3736 | ambiguous | -0.541 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.481901133 | None | None | N |
I/G | 0.8581 | likely_pathogenic | 0.8664 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
I/H | 0.815 | likely_pathogenic | 0.7996 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
I/K | 0.7025 | likely_pathogenic | 0.6907 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
I/L | 0.1933 | likely_benign | 0.1947 | benign | -0.284 | Destabilizing | 0.993 | D | 0.261 | neutral | N | 0.475029052 | None | None | N |
I/M | 0.169 | likely_benign | 0.1623 | benign | -0.441 | Destabilizing | 1.0 | D | 0.629 | neutral | N | 0.478467527 | None | None | N |
I/N | 0.5645 | likely_pathogenic | 0.582 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.468562094 | None | None | N |
I/P | 0.8935 | likely_pathogenic | 0.8899 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
I/Q | 0.6801 | likely_pathogenic | 0.6753 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
I/R | 0.5997 | likely_pathogenic | 0.5918 | pathogenic | 0.182 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
I/S | 0.5069 | ambiguous | 0.5251 | ambiguous | -0.715 | Destabilizing | 1.0 | D | 0.632 | neutral | N | 0.458501586 | None | None | N |
I/T | 0.3179 | likely_benign | 0.3177 | benign | -0.676 | Destabilizing | 1.0 | D | 0.577 | neutral | N | 0.463065737 | None | None | N |
I/V | 0.1487 | likely_benign | 0.1533 | benign | -0.366 | Destabilizing | 0.993 | D | 0.258 | neutral | N | 0.469766204 | None | None | N |
I/W | 0.9011 | likely_pathogenic | 0.882 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/Y | 0.7946 | likely_pathogenic | 0.7756 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.