Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16820 | 50683;50684;50685 | chr2:178611851;178611850;178611849 | chr2:179476578;179476577;179476576 |
N2AB | 15179 | 45760;45761;45762 | chr2:178611851;178611850;178611849 | chr2:179476578;179476577;179476576 |
N2A | 14252 | 42979;42980;42981 | chr2:178611851;178611850;178611849 | chr2:179476578;179476577;179476576 |
N2B | 7755 | 23488;23489;23490 | chr2:178611851;178611850;178611849 | chr2:179476578;179476577;179476576 |
Novex-1 | 7880 | 23863;23864;23865 | chr2:178611851;178611850;178611849 | chr2:179476578;179476577;179476576 |
Novex-2 | 7947 | 24064;24065;24066 | chr2:178611851;178611850;178611849 | chr2:179476578;179476577;179476576 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.993 | N | 0.719 | 0.403 | 0.514811571519 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2096 | likely_benign | 0.1746 | benign | -0.851 | Destabilizing | 0.977 | D | 0.436 | neutral | N | 0.48965272 | None | None | N |
T/C | 0.7043 | likely_pathogenic | 0.6128 | pathogenic | -0.602 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
T/D | 0.7759 | likely_pathogenic | 0.773 | pathogenic | 0.05 | Stabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/E | 0.6702 | likely_pathogenic | 0.6704 | pathogenic | 0.057 | Stabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/F | 0.7346 | likely_pathogenic | 0.6994 | pathogenic | -0.885 | Destabilizing | 0.995 | D | 0.738 | prob.delet. | None | None | None | None | N |
T/G | 0.4773 | ambiguous | 0.4489 | ambiguous | -1.108 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/H | 0.6597 | likely_pathogenic | 0.6069 | pathogenic | -1.309 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/I | 0.7173 | likely_pathogenic | 0.6884 | pathogenic | -0.259 | Destabilizing | 0.987 | D | 0.709 | prob.delet. | D | 0.525222026 | None | None | N |
T/K | 0.6153 | likely_pathogenic | 0.5877 | pathogenic | -0.62 | Destabilizing | 0.993 | D | 0.719 | prob.delet. | N | 0.494084507 | None | None | N |
T/L | 0.3624 | ambiguous | 0.3356 | benign | -0.259 | Destabilizing | 0.906 | D | 0.47 | neutral | None | None | None | None | N |
T/M | 0.2196 | likely_benign | 0.1939 | benign | -0.089 | Destabilizing | 0.921 | D | 0.407 | neutral | None | None | None | None | N |
T/N | 0.3138 | likely_benign | 0.3091 | benign | -0.57 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/P | 0.875 | likely_pathogenic | 0.8543 | pathogenic | -0.424 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | D | 0.675380282 | None | None | N |
T/Q | 0.4936 | ambiguous | 0.4875 | ambiguous | -0.726 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/R | 0.5715 | likely_pathogenic | 0.5338 | ambiguous | -0.409 | Destabilizing | 0.997 | D | 0.721 | prob.delet. | N | 0.488419691 | None | None | N |
T/S | 0.1769 | likely_benign | 0.171 | benign | -0.919 | Destabilizing | 0.989 | D | 0.495 | neutral | N | 0.493377405 | None | None | N |
T/V | 0.4778 | ambiguous | 0.4436 | ambiguous | -0.424 | Destabilizing | 0.966 | D | 0.465 | neutral | None | None | None | None | N |
T/W | 0.906 | likely_pathogenic | 0.8958 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/Y | 0.7521 | likely_pathogenic | 0.7149 | pathogenic | -0.55 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.