Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16826 | 50701;50702;50703 | chr2:178611833;178611832;178611831 | chr2:179476560;179476559;179476558 |
N2AB | 15185 | 45778;45779;45780 | chr2:178611833;178611832;178611831 | chr2:179476560;179476559;179476558 |
N2A | 14258 | 42997;42998;42999 | chr2:178611833;178611832;178611831 | chr2:179476560;179476559;179476558 |
N2B | 7761 | 23506;23507;23508 | chr2:178611833;178611832;178611831 | chr2:179476560;179476559;179476558 |
Novex-1 | 7886 | 23881;23882;23883 | chr2:178611833;178611832;178611831 | chr2:179476560;179476559;179476558 |
Novex-2 | 7953 | 24082;24083;24084 | chr2:178611833;178611832;178611831 | chr2:179476560;179476559;179476558 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.997 | D | 0.697 | 0.575 | 0.733398536896 | gnomAD-4.0.0 | 4.10712E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39861E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9443 | likely_pathogenic | 0.9368 | pathogenic | -2.403 | Highly Destabilizing | 0.999 | D | 0.679 | prob.neutral | D | 0.712658638 | None | None | N |
V/C | 0.9842 | likely_pathogenic | 0.9801 | pathogenic | -1.981 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/D | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -3.417 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | D | 0.787334041 | None | None | N |
V/E | 0.9967 | likely_pathogenic | 0.9971 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/F | 0.976 | likely_pathogenic | 0.9699 | pathogenic | -1.277 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.786292884 | None | None | N |
V/G | 0.9586 | likely_pathogenic | 0.9595 | pathogenic | -3.009 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.787334041 | None | None | N |
V/H | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -2.875 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/I | 0.2123 | likely_benign | 0.1996 | benign | -0.633 | Destabilizing | 0.997 | D | 0.653 | neutral | N | 0.514449954 | None | None | N |
V/K | 0.9981 | likely_pathogenic | 0.9983 | pathogenic | -1.912 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/L | 0.8713 | likely_pathogenic | 0.8639 | pathogenic | -0.633 | Destabilizing | 0.997 | D | 0.697 | prob.neutral | D | 0.694431663 | None | None | N |
V/M | 0.9393 | likely_pathogenic | 0.9282 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/N | 0.9975 | likely_pathogenic | 0.9972 | pathogenic | -2.587 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
V/P | 0.998 | likely_pathogenic | 0.9979 | pathogenic | -1.205 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
V/Q | 0.9972 | likely_pathogenic | 0.9972 | pathogenic | -2.235 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
V/R | 0.9956 | likely_pathogenic | 0.9958 | pathogenic | -1.996 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
V/S | 0.9891 | likely_pathogenic | 0.9882 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.9697 | likely_pathogenic | 0.9694 | pathogenic | -2.624 | Highly Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/W | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -1.859 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/Y | 0.9978 | likely_pathogenic | 0.9974 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.