Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16829 | 50710;50711;50712 | chr2:178611824;178611823;178611822 | chr2:179476551;179476550;179476549 |
N2AB | 15188 | 45787;45788;45789 | chr2:178611824;178611823;178611822 | chr2:179476551;179476550;179476549 |
N2A | 14261 | 43006;43007;43008 | chr2:178611824;178611823;178611822 | chr2:179476551;179476550;179476549 |
N2B | 7764 | 23515;23516;23517 | chr2:178611824;178611823;178611822 | chr2:179476551;179476550;179476549 |
Novex-1 | 7889 | 23890;23891;23892 | chr2:178611824;178611823;178611822 | chr2:179476551;179476550;179476549 |
Novex-2 | 7956 | 24091;24092;24093 | chr2:178611824;178611823;178611822 | chr2:179476551;179476550;179476549 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs777736610 | -1.696 | 0.834 | D | 0.387 | 0.239 | 0.349647731962 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.7266 | likely_pathogenic | 0.6289 | pathogenic | -1.023 | Destabilizing | 0.716 | D | 0.493 | neutral | N | 0.491314575 | None | None | N |
E/C | 0.9846 | likely_pathogenic | 0.9777 | pathogenic | -0.773 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
E/D | 0.8718 | likely_pathogenic | 0.8379 | pathogenic | -1.597 | Destabilizing | 0.834 | D | 0.387 | neutral | D | 0.614839725 | None | None | N |
E/F | 0.9845 | likely_pathogenic | 0.9768 | pathogenic | -1.001 | Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | N |
E/G | 0.8659 | likely_pathogenic | 0.8047 | pathogenic | -1.39 | Destabilizing | 0.946 | D | 0.711 | prob.delet. | D | 0.614839725 | None | None | N |
E/H | 0.9736 | likely_pathogenic | 0.9576 | pathogenic | -1.266 | Destabilizing | 0.994 | D | 0.653 | neutral | None | None | None | None | N |
E/I | 0.8365 | likely_pathogenic | 0.7916 | pathogenic | -0.016 | Destabilizing | 0.979 | D | 0.843 | deleterious | None | None | None | None | N |
E/K | 0.8306 | likely_pathogenic | 0.7598 | pathogenic | -1.11 | Destabilizing | 0.016 | N | 0.295 | neutral | N | 0.467929891 | None | None | N |
E/L | 0.9417 | likely_pathogenic | 0.9082 | pathogenic | -0.016 | Destabilizing | 0.959 | D | 0.793 | deleterious | None | None | None | None | N |
E/M | 0.8991 | likely_pathogenic | 0.8544 | pathogenic | 0.53 | Stabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
E/N | 0.9595 | likely_pathogenic | 0.9411 | pathogenic | -1.383 | Destabilizing | 0.959 | D | 0.621 | neutral | None | None | None | None | N |
E/P | 0.9995 | likely_pathogenic | 0.999 | pathogenic | -0.332 | Destabilizing | 0.979 | D | 0.793 | deleterious | None | None | None | None | N |
E/Q | 0.4984 | ambiguous | 0.4172 | ambiguous | -1.212 | Destabilizing | 0.716 | D | 0.533 | neutral | N | 0.469100983 | None | None | N |
E/R | 0.9059 | likely_pathogenic | 0.8626 | pathogenic | -1.021 | Destabilizing | 0.921 | D | 0.617 | neutral | None | None | None | None | N |
E/S | 0.8208 | likely_pathogenic | 0.7512 | pathogenic | -1.873 | Destabilizing | 0.769 | D | 0.42 | neutral | None | None | None | None | N |
E/T | 0.8623 | likely_pathogenic | 0.8054 | pathogenic | -1.546 | Destabilizing | 0.959 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/V | 0.6656 | likely_pathogenic | 0.5913 | pathogenic | -0.332 | Destabilizing | 0.946 | D | 0.777 | deleterious | N | 0.454885652 | None | None | N |
E/W | 0.996 | likely_pathogenic | 0.9936 | pathogenic | -1.049 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
E/Y | 0.9843 | likely_pathogenic | 0.9761 | pathogenic | -0.803 | Destabilizing | 0.993 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.