Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16834 | 50725;50726;50727 | chr2:178611809;178611808;178611807 | chr2:179476536;179476535;179476534 |
N2AB | 15193 | 45802;45803;45804 | chr2:178611809;178611808;178611807 | chr2:179476536;179476535;179476534 |
N2A | 14266 | 43021;43022;43023 | chr2:178611809;178611808;178611807 | chr2:179476536;179476535;179476534 |
N2B | 7769 | 23530;23531;23532 | chr2:178611809;178611808;178611807 | chr2:179476536;179476535;179476534 |
Novex-1 | 7894 | 23905;23906;23907 | chr2:178611809;178611808;178611807 | chr2:179476536;179476535;179476534 |
Novex-2 | 7961 | 24106;24107;24108 | chr2:178611809;178611808;178611807 | chr2:179476536;179476535;179476534 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.027 | N | 0.471 | 0.06 | 0.317084106153 | gnomAD-4.0.0 | 1.59328E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86171E-06 | 0 | 0 |
V/I | None | None | None | N | 0.217 | 0.051 | 0.262662153117 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2503 | likely_benign | 0.3228 | benign | -1.09 | Destabilizing | 0.027 | N | 0.471 | neutral | N | 0.475720943 | None | None | N |
V/C | 0.724 | likely_pathogenic | 0.709 | pathogenic | -0.858 | Destabilizing | 0.001 | N | 0.351 | neutral | None | None | None | None | N |
V/D | 0.7311 | likely_pathogenic | 0.8223 | pathogenic | -0.877 | Destabilizing | 0.317 | N | 0.693 | prob.neutral | N | 0.512208731 | None | None | N |
V/E | 0.6109 | likely_pathogenic | 0.7248 | pathogenic | -0.966 | Destabilizing | 0.555 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/F | 0.2476 | likely_benign | 0.3322 | benign | -1.158 | Destabilizing | 0.317 | N | 0.643 | neutral | N | 0.495942242 | None | None | N |
V/G | 0.4151 | ambiguous | 0.5143 | ambiguous | -1.29 | Destabilizing | None | N | 0.498 | neutral | D | 0.534410464 | None | None | N |
V/H | 0.8164 | likely_pathogenic | 0.8811 | pathogenic | -0.733 | Destabilizing | 0.935 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/I | 0.0794 | likely_benign | 0.0864 | benign | -0.684 | Destabilizing | None | N | 0.217 | neutral | N | 0.469351893 | None | None | N |
V/K | 0.7609 | likely_pathogenic | 0.823 | pathogenic | -0.753 | Destabilizing | 0.38 | N | 0.681 | prob.neutral | None | None | None | None | N |
V/L | 0.2945 | likely_benign | 0.3661 | ambiguous | -0.684 | Destabilizing | 0.009 | N | 0.408 | neutral | N | 0.464043847 | None | None | N |
V/M | 0.2062 | likely_benign | 0.2653 | benign | -0.498 | Destabilizing | 0.38 | N | 0.629 | neutral | None | None | None | None | N |
V/N | 0.4956 | ambiguous | 0.6245 | pathogenic | -0.48 | Destabilizing | 0.38 | N | 0.696 | prob.neutral | None | None | None | None | N |
V/P | 0.7537 | likely_pathogenic | 0.7561 | pathogenic | -0.784 | Destabilizing | 0.555 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/Q | 0.6069 | likely_pathogenic | 0.6982 | pathogenic | -0.794 | Destabilizing | 0.555 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/R | 0.6954 | likely_pathogenic | 0.7584 | pathogenic | -0.141 | Destabilizing | 0.555 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/S | 0.3378 | likely_benign | 0.4429 | ambiguous | -0.93 | Destabilizing | 0.081 | N | 0.665 | neutral | None | None | None | None | N |
V/T | 0.2201 | likely_benign | 0.2874 | benign | -0.919 | Destabilizing | 0.149 | N | 0.509 | neutral | None | None | None | None | N |
V/W | 0.9034 | likely_pathogenic | 0.9342 | pathogenic | -1.186 | Destabilizing | 0.935 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/Y | 0.7302 | likely_pathogenic | 0.7891 | pathogenic | -0.904 | Destabilizing | 0.555 | D | 0.623 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.