Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16846 | 50761;50762;50763 | chr2:178611773;178611772;178611771 | chr2:179476500;179476499;179476498 |
N2AB | 15205 | 45838;45839;45840 | chr2:178611773;178611772;178611771 | chr2:179476500;179476499;179476498 |
N2A | 14278 | 43057;43058;43059 | chr2:178611773;178611772;178611771 | chr2:179476500;179476499;179476498 |
N2B | 7781 | 23566;23567;23568 | chr2:178611773;178611772;178611771 | chr2:179476500;179476499;179476498 |
Novex-1 | 7906 | 23941;23942;23943 | chr2:178611773;178611772;178611771 | chr2:179476500;179476499;179476498 |
Novex-2 | 7973 | 24142;24143;24144 | chr2:178611773;178611772;178611771 | chr2:179476500;179476499;179476498 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1432294105 | None | 0.041 | N | 0.517 | 0.141 | 0.304435445954 | gnomAD-4.0.0 | 6.84983E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00037E-07 | 0 | 0 |
I/S | rs753344121 | -3.271 | 0.191 | N | 0.717 | 0.305 | 0.613722742674 | gnomAD-2.1.1 | 1.62E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.24291E-04 | None | 0 | None | 0 | 0 | 0 |
I/S | rs753344121 | -3.271 | 0.191 | N | 0.717 | 0.305 | 0.613722742674 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94628E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/S | rs753344121 | -3.271 | 0.191 | N | 0.717 | 0.305 | 0.613722742674 | gnomAD-4.0.0 | 3.72223E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.93895E-05 | None | 0 | 0 | 0 | 0 | 3.20636E-05 |
I/T | rs753344121 | -2.967 | 0.001 | N | 0.518 | 0.26 | 0.524584940466 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.5703E-04 | None | 0 | None | 0 | 0 | 0 |
I/T | rs753344121 | -2.967 | 0.001 | N | 0.518 | 0.26 | 0.524584940466 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94628E-04 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/T | rs753344121 | -2.967 | 0.001 | N | 0.518 | 0.26 | 0.524584940466 | gnomAD-4.0.0 | 7.44446E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23474E-05 | None | 0 | 0 | 5.9372E-06 | 1.10205E-05 | 4.80954E-05 |
I/V | rs1432294105 | -1.942 | 0.003 | N | 0.208 | 0.073 | 0.337621943819 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs1432294105 | -1.942 | 0.003 | N | 0.208 | 0.073 | 0.337621943819 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1432294105 | -1.942 | 0.003 | N | 0.208 | 0.073 | 0.337621943819 | gnomAD-4.0.0 | 2.48153E-06 | None | None | None | None | N | None | 2.67415E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.20381E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8725 | likely_pathogenic | 0.8759 | pathogenic | -2.592 | Highly Destabilizing | 0.115 | N | 0.661 | prob.neutral | None | None | None | None | N |
I/C | 0.9664 | likely_pathogenic | 0.9622 | pathogenic | -2.626 | Highly Destabilizing | 0.944 | D | 0.706 | prob.delet. | None | None | None | None | N |
I/D | 0.9984 | likely_pathogenic | 0.9986 | pathogenic | -3.133 | Highly Destabilizing | 0.687 | D | 0.795 | deleterious | None | None | None | None | N |
I/E | 0.9942 | likely_pathogenic | 0.9952 | pathogenic | -2.988 | Highly Destabilizing | 0.687 | D | 0.771 | deleterious | None | None | None | None | N |
I/F | 0.7115 | likely_pathogenic | 0.7168 | pathogenic | -1.658 | Destabilizing | 0.771 | D | 0.7 | prob.delet. | D | 0.538508634 | None | None | N |
I/G | 0.9919 | likely_pathogenic | 0.9929 | pathogenic | -3.03 | Highly Destabilizing | 0.687 | D | 0.735 | deleterious | None | None | None | None | N |
I/H | 0.9946 | likely_pathogenic | 0.9951 | pathogenic | -2.175 | Highly Destabilizing | 0.981 | D | 0.801 | deleterious | None | None | None | None | N |
I/K | 0.9892 | likely_pathogenic | 0.9918 | pathogenic | -2.057 | Highly Destabilizing | 0.687 | D | 0.771 | deleterious | None | None | None | None | N |
I/L | 0.386 | ambiguous | 0.393 | ambiguous | -1.361 | Destabilizing | 0.041 | N | 0.517 | neutral | N | 0.461966749 | None | None | N |
I/M | 0.3914 | ambiguous | 0.3944 | ambiguous | -1.696 | Destabilizing | 0.771 | D | 0.664 | prob.neutral | N | 0.473644101 | None | None | N |
I/N | 0.9814 | likely_pathogenic | 0.9828 | pathogenic | -2.325 | Highly Destabilizing | 0.624 | D | 0.808 | deleterious | N | 0.51264135 | None | None | N |
I/P | 0.9738 | likely_pathogenic | 0.9742 | pathogenic | -1.751 | Destabilizing | 0.817 | D | 0.807 | deleterious | None | None | None | None | N |
I/Q | 0.9899 | likely_pathogenic | 0.9916 | pathogenic | -2.371 | Highly Destabilizing | 0.817 | D | 0.797 | deleterious | None | None | None | None | N |
I/R | 0.9809 | likely_pathogenic | 0.9859 | pathogenic | -1.569 | Destabilizing | 0.687 | D | 0.798 | deleterious | None | None | None | None | N |
I/S | 0.9495 | likely_pathogenic | 0.9546 | pathogenic | -2.981 | Highly Destabilizing | 0.191 | N | 0.717 | prob.delet. | N | 0.463728274 | None | None | N |
I/T | 0.7846 | likely_pathogenic | 0.7852 | pathogenic | -2.704 | Highly Destabilizing | 0.001 | N | 0.518 | neutral | N | 0.466977191 | None | None | N |
I/V | 0.0955 | likely_benign | 0.094 | benign | -1.751 | Destabilizing | 0.003 | N | 0.208 | neutral | N | 0.470816905 | None | None | N |
I/W | 0.9926 | likely_pathogenic | 0.993 | pathogenic | -1.835 | Destabilizing | 0.981 | D | 0.783 | deleterious | None | None | None | None | N |
I/Y | 0.9823 | likely_pathogenic | 0.983 | pathogenic | -1.626 | Destabilizing | 0.817 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.