Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16847 | 50764;50765;50766 | chr2:178611770;178611769;178611768 | chr2:179476497;179476496;179476495 |
N2AB | 15206 | 45841;45842;45843 | chr2:178611770;178611769;178611768 | chr2:179476497;179476496;179476495 |
N2A | 14279 | 43060;43061;43062 | chr2:178611770;178611769;178611768 | chr2:179476497;179476496;179476495 |
N2B | 7782 | 23569;23570;23571 | chr2:178611770;178611769;178611768 | chr2:179476497;179476496;179476495 |
Novex-1 | 7907 | 23944;23945;23946 | chr2:178611770;178611769;178611768 | chr2:179476497;179476496;179476495 |
Novex-2 | 7974 | 24145;24146;24147 | chr2:178611770;178611769;178611768 | chr2:179476497;179476496;179476495 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs760623859 | -1.08 | 0.003 | N | 0.392 | 0.202 | 0.254761474806 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.61E-05 | None | 0 | 0 | 0 |
E/G | rs760623859 | -1.08 | 0.003 | N | 0.392 | 0.202 | 0.254761474806 | gnomAD-4.0.0 | 4.78643E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.8796E-05 | 3.03177E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2667 | likely_benign | 0.2463 | benign | -0.843 | Destabilizing | 0.297 | N | 0.499 | neutral | N | 0.475197978 | None | None | N |
E/C | 0.929 | likely_pathogenic | 0.8943 | pathogenic | -0.248 | Destabilizing | 0.989 | D | 0.779 | deleterious | None | None | None | None | N |
E/D | 0.3112 | likely_benign | 0.2968 | benign | -0.761 | Destabilizing | 0.457 | N | 0.456 | neutral | N | 0.50132732 | None | None | N |
E/F | 0.9332 | likely_pathogenic | 0.9073 | pathogenic | -0.662 | Destabilizing | 0.989 | D | 0.745 | deleterious | None | None | None | None | N |
E/G | 0.3863 | ambiguous | 0.3462 | ambiguous | -1.116 | Destabilizing | 0.003 | N | 0.392 | neutral | N | 0.47128159 | None | None | N |
E/H | 0.7885 | likely_pathogenic | 0.6751 | pathogenic | -0.838 | Destabilizing | 0.989 | D | 0.532 | neutral | None | None | None | None | N |
E/I | 0.6102 | likely_pathogenic | 0.5445 | ambiguous | -0.124 | Destabilizing | 0.888 | D | 0.777 | deleterious | None | None | None | None | N |
E/K | 0.3516 | ambiguous | 0.2455 | benign | -0.147 | Destabilizing | 0.457 | N | 0.609 | neutral | N | 0.449280803 | None | None | N |
E/L | 0.6448 | likely_pathogenic | 0.6076 | pathogenic | -0.124 | Destabilizing | 0.888 | D | 0.76 | deleterious | None | None | None | None | N |
E/M | 0.6968 | likely_pathogenic | 0.6401 | pathogenic | 0.273 | Stabilizing | 0.989 | D | 0.722 | deleterious | None | None | None | None | N |
E/N | 0.5633 | ambiguous | 0.5055 | ambiguous | -0.502 | Destabilizing | 0.797 | D | 0.609 | neutral | None | None | None | None | N |
E/P | 0.8534 | likely_pathogenic | 0.9434 | pathogenic | -0.343 | Destabilizing | 0.888 | D | 0.569 | neutral | None | None | None | None | N |
E/Q | 0.2448 | likely_benign | 0.1812 | benign | -0.456 | Destabilizing | 0.857 | D | 0.624 | neutral | N | 0.469032826 | None | None | N |
E/R | 0.5346 | ambiguous | 0.4004 | ambiguous | -0.022 | Destabilizing | 0.888 | D | 0.584 | neutral | None | None | None | None | N |
E/S | 0.3738 | ambiguous | 0.3243 | benign | -0.741 | Destabilizing | 0.359 | N | 0.603 | neutral | None | None | None | None | N |
E/T | 0.3951 | ambiguous | 0.302 | benign | -0.515 | Destabilizing | 0.797 | D | 0.545 | neutral | None | None | None | None | N |
E/V | 0.3955 | ambiguous | 0.3199 | benign | -0.343 | Destabilizing | 0.857 | D | 0.7 | prob.delet. | N | 0.474232013 | None | None | N |
E/W | 0.9801 | likely_pathogenic | 0.9721 | pathogenic | -0.451 | Destabilizing | 0.989 | D | 0.781 | deleterious | None | None | None | None | N |
E/Y | 0.9003 | likely_pathogenic | 0.8668 | pathogenic | -0.406 | Destabilizing | 0.96 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.