Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16854 | 50785;50786;50787 | chr2:178611669;178611668;178611667 | chr2:179476396;179476395;179476394 |
N2AB | 15213 | 45862;45863;45864 | chr2:178611669;178611668;178611667 | chr2:179476396;179476395;179476394 |
N2A | 14286 | 43081;43082;43083 | chr2:178611669;178611668;178611667 | chr2:179476396;179476395;179476394 |
N2B | 7789 | 23590;23591;23592 | chr2:178611669;178611668;178611667 | chr2:179476396;179476395;179476394 |
Novex-1 | 7914 | 23965;23966;23967 | chr2:178611669;178611668;178611667 | chr2:179476396;179476395;179476394 |
Novex-2 | 7981 | 24166;24167;24168 | chr2:178611669;178611668;178611667 | chr2:179476396;179476395;179476394 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 1.0 | D | 0.859 | 0.457 | 0.661710244528 | gnomAD-4.0.0 | 3.18705E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72371E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.193 | likely_benign | 0.2389 | benign | -0.667 | Destabilizing | 0.997 | D | 0.707 | prob.neutral | D | 0.613066097 | None | None | N |
S/C | 0.3689 | ambiguous | 0.4112 | ambiguous | -0.622 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
S/D | 0.8615 | likely_pathogenic | 0.9111 | pathogenic | -1.068 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
S/E | 0.9051 | likely_pathogenic | 0.9481 | pathogenic | -1.002 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
S/F | 0.6327 | likely_pathogenic | 0.7328 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
S/G | 0.1624 | likely_benign | 0.1736 | benign | -0.987 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
S/H | 0.8404 | likely_pathogenic | 0.8916 | pathogenic | -1.464 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
S/I | 0.6785 | likely_pathogenic | 0.8076 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
S/K | 0.9731 | likely_pathogenic | 0.9879 | pathogenic | -0.875 | Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
S/L | 0.2683 | likely_benign | 0.3555 | ambiguous | 0.096 | Stabilizing | 1.0 | D | 0.859 | deleterious | D | 0.652414251 | None | None | N |
S/M | 0.5449 | ambiguous | 0.6358 | pathogenic | 0.269 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
S/N | 0.5807 | likely_pathogenic | 0.68 | pathogenic | -1.092 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
S/P | 0.9432 | likely_pathogenic | 0.9614 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.647328253 | None | None | N |
S/Q | 0.8887 | likely_pathogenic | 0.9357 | pathogenic | -1.125 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
S/R | 0.9633 | likely_pathogenic | 0.9825 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
S/T | 0.1969 | likely_benign | 0.2685 | benign | -0.924 | Destabilizing | 0.999 | D | 0.754 | deleterious | D | 0.532521139 | None | None | N |
S/V | 0.6274 | likely_pathogenic | 0.7574 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
S/W | 0.8475 | likely_pathogenic | 0.8965 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
S/Y | 0.664 | likely_pathogenic | 0.7609 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.