Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16870 | 50833;50834;50835 | chr2:178611621;178611620;178611619 | chr2:179476348;179476347;179476346 |
N2AB | 15229 | 45910;45911;45912 | chr2:178611621;178611620;178611619 | chr2:179476348;179476347;179476346 |
N2A | 14302 | 43129;43130;43131 | chr2:178611621;178611620;178611619 | chr2:179476348;179476347;179476346 |
N2B | 7805 | 23638;23639;23640 | chr2:178611621;178611620;178611619 | chr2:179476348;179476347;179476346 |
Novex-1 | 7930 | 24013;24014;24015 | chr2:178611621;178611620;178611619 | chr2:179476348;179476347;179476346 |
Novex-2 | 7997 | 24214;24215;24216 | chr2:178611621;178611620;178611619 | chr2:179476348;179476347;179476346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.379 | N | 0.563 | 0.146 | 0.269111216191 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4313 | ambiguous | 0.5082 | ambiguous | -1.236 | Destabilizing | 0.005 | N | 0.414 | neutral | None | None | None | None | N |
A/D | 0.3555 | ambiguous | 0.3454 | ambiguous | -2.535 | Highly Destabilizing | 0.004 | N | 0.509 | neutral | N | 0.436390056 | None | None | N |
A/E | 0.4062 | ambiguous | 0.421 | ambiguous | -2.454 | Highly Destabilizing | 0.447 | N | 0.621 | neutral | None | None | None | None | N |
A/F | 0.4493 | ambiguous | 0.4951 | ambiguous | -1.083 | Destabilizing | 0.972 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/G | 0.2173 | likely_benign | 0.2308 | benign | -1.635 | Destabilizing | 0.201 | N | 0.525 | neutral | N | 0.468948375 | None | None | N |
A/H | 0.5921 | likely_pathogenic | 0.6124 | pathogenic | -2.077 | Highly Destabilizing | 0.992 | D | 0.655 | neutral | None | None | None | None | N |
A/I | 0.3424 | ambiguous | 0.399 | ambiguous | -0.308 | Destabilizing | 0.85 | D | 0.716 | prob.delet. | None | None | None | None | N |
A/K | 0.7904 | likely_pathogenic | 0.8068 | pathogenic | -1.719 | Destabilizing | 0.617 | D | 0.659 | neutral | None | None | None | None | N |
A/L | 0.257 | likely_benign | 0.2859 | benign | -0.308 | Destabilizing | 0.447 | N | 0.629 | neutral | None | None | None | None | N |
A/M | 0.2827 | likely_benign | 0.3158 | benign | -0.231 | Destabilizing | 0.992 | D | 0.655 | neutral | None | None | None | None | N |
A/N | 0.2619 | likely_benign | 0.2778 | benign | -1.7 | Destabilizing | 0.447 | N | 0.694 | prob.neutral | None | None | None | None | N |
A/P | 0.9449 | likely_pathogenic | 0.9447 | pathogenic | -0.583 | Destabilizing | 0.896 | D | 0.715 | prob.delet. | N | 0.479681287 | None | None | N |
A/Q | 0.469 | ambiguous | 0.4887 | ambiguous | -1.703 | Destabilizing | 0.85 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/R | 0.7058 | likely_pathogenic | 0.7235 | pathogenic | -1.483 | Destabilizing | 0.85 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/S | 0.084 | likely_benign | 0.0849 | benign | -2.005 | Highly Destabilizing | 0.007 | N | 0.243 | neutral | N | 0.42776826 | None | None | N |
A/T | 0.0946 | likely_benign | 0.0977 | benign | -1.83 | Destabilizing | 0.379 | N | 0.563 | neutral | N | 0.36331042 | None | None | N |
A/V | 0.1666 | likely_benign | 0.1904 | benign | -0.583 | Destabilizing | 0.549 | D | 0.577 | neutral | N | 0.428759168 | None | None | N |
A/W | 0.8772 | likely_pathogenic | 0.8911 | pathogenic | -1.744 | Destabilizing | 0.992 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/Y | 0.6257 | likely_pathogenic | 0.655 | pathogenic | -1.284 | Destabilizing | 0.972 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.