Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16871 | 50836;50837;50838 | chr2:178611618;178611617;178611616 | chr2:179476345;179476344;179476343 |
N2AB | 15230 | 45913;45914;45915 | chr2:178611618;178611617;178611616 | chr2:179476345;179476344;179476343 |
N2A | 14303 | 43132;43133;43134 | chr2:178611618;178611617;178611616 | chr2:179476345;179476344;179476343 |
N2B | 7806 | 23641;23642;23643 | chr2:178611618;178611617;178611616 | chr2:179476345;179476344;179476343 |
Novex-1 | 7931 | 24016;24017;24018 | chr2:178611618;178611617;178611616 | chr2:179476345;179476344;179476343 |
Novex-2 | 7998 | 24217;24218;24219 | chr2:178611618;178611617;178611616 | chr2:179476345;179476344;179476343 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs763229497 | -1.228 | 0.333 | N | 0.165 | 0.125 | 0.374076547971 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs763229497 | -1.228 | 0.333 | N | 0.165 | 0.125 | 0.374076547971 | gnomAD-4.0.0 | 1.59285E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8763 | likely_pathogenic | 0.902 | pathogenic | -2.834 | Highly Destabilizing | 0.992 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/C | 0.9631 | likely_pathogenic | 0.9703 | pathogenic | -2.099 | Highly Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/D | 0.9995 | likely_pathogenic | 0.9995 | pathogenic | -3.735 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
I/E | 0.9983 | likely_pathogenic | 0.9982 | pathogenic | -3.434 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
I/F | 0.5923 | likely_pathogenic | 0.649 | pathogenic | -1.731 | Destabilizing | 0.998 | D | 0.654 | neutral | D | 0.538603086 | None | None | N |
I/G | 0.9936 | likely_pathogenic | 0.9951 | pathogenic | -3.425 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
I/H | 0.9982 | likely_pathogenic | 0.9981 | pathogenic | -3.093 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
I/K | 0.9973 | likely_pathogenic | 0.9967 | pathogenic | -2.427 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
I/L | 0.2119 | likely_benign | 0.2215 | benign | -1.067 | Destabilizing | 0.889 | D | 0.363 | neutral | N | 0.412910645 | None | None | N |
I/M | 0.2551 | likely_benign | 0.2644 | benign | -1.114 | Destabilizing | 0.998 | D | 0.643 | neutral | N | 0.475792113 | None | None | N |
I/N | 0.9948 | likely_pathogenic | 0.9945 | pathogenic | -3.078 | Highly Destabilizing | 0.999 | D | 0.909 | deleterious | D | 0.647305898 | None | None | N |
I/P | 0.9968 | likely_pathogenic | 0.9968 | pathogenic | -1.646 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
I/Q | 0.997 | likely_pathogenic | 0.9968 | pathogenic | -2.789 | Highly Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
I/R | 0.9949 | likely_pathogenic | 0.9946 | pathogenic | -2.291 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
I/S | 0.9817 | likely_pathogenic | 0.9832 | pathogenic | -3.636 | Highly Destabilizing | 0.998 | D | 0.845 | deleterious | D | 0.608639731 | None | None | N |
I/T | 0.9245 | likely_pathogenic | 0.9323 | pathogenic | -3.182 | Highly Destabilizing | 0.989 | D | 0.734 | prob.delet. | D | 0.608639731 | None | None | N |
I/V | 0.1027 | likely_benign | 0.1192 | benign | -1.646 | Destabilizing | 0.333 | N | 0.165 | neutral | N | 0.453669184 | None | None | N |
I/W | 0.9954 | likely_pathogenic | 0.9959 | pathogenic | -2.248 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
I/Y | 0.9829 | likely_pathogenic | 0.9844 | pathogenic | -1.98 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.