Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16874 | 50845;50846;50847 | chr2:178611609;178611608;178611607 | chr2:179476336;179476335;179476334 |
N2AB | 15233 | 45922;45923;45924 | chr2:178611609;178611608;178611607 | chr2:179476336;179476335;179476334 |
N2A | 14306 | 43141;43142;43143 | chr2:178611609;178611608;178611607 | chr2:179476336;179476335;179476334 |
N2B | 7809 | 23650;23651;23652 | chr2:178611609;178611608;178611607 | chr2:179476336;179476335;179476334 |
Novex-1 | 7934 | 24025;24026;24027 | chr2:178611609;178611608;178611607 | chr2:179476336;179476335;179476334 |
Novex-2 | 8001 | 24226;24227;24228 | chr2:178611609;178611608;178611607 | chr2:179476336;179476335;179476334 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.999 | N | 0.575 | 0.444 | 0.301455362545 | gnomAD-4.0.0 | 6.84504E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99755E-07 | 0 | 0 |
K/T | None | None | 1.0 | N | 0.797 | 0.471 | 0.392395365052 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6867 | likely_pathogenic | 0.6494 | pathogenic | -0.393 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/C | 0.8965 | likely_pathogenic | 0.8628 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
K/D | 0.8585 | likely_pathogenic | 0.8242 | pathogenic | -0.098 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
K/E | 0.461 | ambiguous | 0.4058 | ambiguous | 0.001 | Stabilizing | 0.999 | D | 0.575 | neutral | N | 0.458216615 | None | None | N |
K/F | 0.947 | likely_pathogenic | 0.9234 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
K/G | 0.771 | likely_pathogenic | 0.7285 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
K/H | 0.5222 | ambiguous | 0.4871 | ambiguous | -0.947 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
K/I | 0.6345 | likely_pathogenic | 0.5793 | pathogenic | 0.474 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
K/L | 0.5966 | likely_pathogenic | 0.5352 | ambiguous | 0.474 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
K/M | 0.4447 | ambiguous | 0.3902 | ambiguous | 0.163 | Stabilizing | 1.0 | D | 0.781 | deleterious | N | 0.5164882159999999 | None | None | N |
K/N | 0.5857 | likely_pathogenic | 0.5488 | ambiguous | -0.29 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.48394441 | None | None | N |
K/P | 0.9911 | likely_pathogenic | 0.9862 | pathogenic | 0.215 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
K/Q | 0.2252 | likely_benign | 0.2062 | benign | -0.311 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | N | 0.477789264 | None | None | N |
K/R | 0.1385 | likely_benign | 0.1293 | benign | -0.472 | Destabilizing | 0.999 | D | 0.548 | neutral | N | 0.483796743 | None | None | N |
K/S | 0.6862 | likely_pathogenic | 0.6503 | pathogenic | -0.833 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
K/T | 0.4028 | ambiguous | 0.3574 | ambiguous | -0.539 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.474332723 | None | None | N |
K/V | 0.6021 | likely_pathogenic | 0.5492 | ambiguous | 0.215 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
K/W | 0.9628 | likely_pathogenic | 0.9327 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
K/Y | 0.8764 | likely_pathogenic | 0.8283 | pathogenic | 0.235 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.