Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16879 | 50860;50861;50862 | chr2:178611594;178611593;178611592 | chr2:179476321;179476320;179476319 |
N2AB | 15238 | 45937;45938;45939 | chr2:178611594;178611593;178611592 | chr2:179476321;179476320;179476319 |
N2A | 14311 | 43156;43157;43158 | chr2:178611594;178611593;178611592 | chr2:179476321;179476320;179476319 |
N2B | 7814 | 23665;23666;23667 | chr2:178611594;178611593;178611592 | chr2:179476321;179476320;179476319 |
Novex-1 | 7939 | 24040;24041;24042 | chr2:178611594;178611593;178611592 | chr2:179476321;179476320;179476319 |
Novex-2 | 8006 | 24241;24242;24243 | chr2:178611594;178611593;178611592 | chr2:179476321;179476320;179476319 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs961819601 | -0.586 | 0.055 | N | 0.481 | 0.135 | 0.16115917748 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
N/S | rs961819601 | -0.586 | 0.055 | N | 0.481 | 0.135 | 0.16115917748 | gnomAD-4.0.0 | 7.96511E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.43073E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6192 | likely_pathogenic | 0.7566 | pathogenic | -0.726 | Destabilizing | 0.272 | N | 0.595 | neutral | None | None | None | None | I |
N/C | 0.7601 | likely_pathogenic | 0.8624 | pathogenic | 0.125 | Stabilizing | 0.968 | D | 0.709 | prob.delet. | None | None | None | None | I |
N/D | 0.1224 | likely_benign | 0.1362 | benign | -0.547 | Destabilizing | None | N | 0.104 | neutral | N | 0.404019171 | None | None | I |
N/E | 0.7799 | likely_pathogenic | 0.8826 | pathogenic | -0.512 | Destabilizing | 0.072 | N | 0.45 | neutral | None | None | None | None | I |
N/F | 0.9148 | likely_pathogenic | 0.9598 | pathogenic | -0.822 | Destabilizing | 0.89 | D | 0.695 | prob.neutral | None | None | None | None | I |
N/G | 0.6307 | likely_pathogenic | 0.7277 | pathogenic | -0.995 | Destabilizing | 0.133 | N | 0.455 | neutral | None | None | None | None | I |
N/H | 0.4671 | ambiguous | 0.5866 | pathogenic | -0.993 | Destabilizing | 0.667 | D | 0.587 | neutral | D | 0.540047154 | None | None | I |
N/I | 0.7371 | likely_pathogenic | 0.8591 | pathogenic | -0.073 | Destabilizing | 0.667 | D | 0.703 | prob.neutral | N | 0.481419669 | None | None | I |
N/K | 0.8599 | likely_pathogenic | 0.9356 | pathogenic | -0.128 | Destabilizing | 0.22 | N | 0.46 | neutral | N | 0.517258583 | None | None | I |
N/L | 0.6987 | likely_pathogenic | 0.841 | pathogenic | -0.073 | Destabilizing | 0.726 | D | 0.64 | neutral | None | None | None | None | I |
N/M | 0.7656 | likely_pathogenic | 0.8684 | pathogenic | 0.543 | Stabilizing | 0.968 | D | 0.679 | prob.neutral | None | None | None | None | I |
N/P | 0.8422 | likely_pathogenic | 0.9099 | pathogenic | -0.262 | Destabilizing | 0.726 | D | 0.667 | neutral | None | None | None | None | I |
N/Q | 0.8134 | likely_pathogenic | 0.9018 | pathogenic | -0.806 | Destabilizing | 0.567 | D | 0.529 | neutral | None | None | None | None | I |
N/R | 0.8849 | likely_pathogenic | 0.9488 | pathogenic | -0.099 | Destabilizing | 0.567 | D | 0.527 | neutral | None | None | None | None | I |
N/S | 0.1784 | likely_benign | 0.217 | benign | -0.609 | Destabilizing | 0.055 | N | 0.481 | neutral | N | 0.470099282 | None | None | I |
N/T | 0.3291 | likely_benign | 0.4075 | ambiguous | -0.4 | Destabilizing | 0.22 | N | 0.447 | neutral | N | 0.477127158 | None | None | I |
N/V | 0.7289 | likely_pathogenic | 0.8463 | pathogenic | -0.262 | Destabilizing | 0.726 | D | 0.673 | neutral | None | None | None | None | I |
N/W | 0.9676 | likely_pathogenic | 0.986 | pathogenic | -0.638 | Destabilizing | 0.968 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/Y | 0.5312 | ambiguous | 0.7105 | pathogenic | -0.405 | Destabilizing | 0.859 | D | 0.687 | prob.neutral | D | 0.635097274 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.