Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16882 | 50869;50870;50871 | chr2:178611585;178611584;178611583 | chr2:179476312;179476311;179476310 |
N2AB | 15241 | 45946;45947;45948 | chr2:178611585;178611584;178611583 | chr2:179476312;179476311;179476310 |
N2A | 14314 | 43165;43166;43167 | chr2:178611585;178611584;178611583 | chr2:179476312;179476311;179476310 |
N2B | 7817 | 23674;23675;23676 | chr2:178611585;178611584;178611583 | chr2:179476312;179476311;179476310 |
Novex-1 | 7942 | 24049;24050;24051 | chr2:178611585;178611584;178611583 | chr2:179476312;179476311;179476310 |
Novex-2 | 8009 | 24250;24251;24252 | chr2:178611585;178611584;178611583 | chr2:179476312;179476311;179476310 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | None | None | 0.997 | D | 0.645 | 0.393 | 0.352048277211 | gnomAD-4.0.0 | 1.59287E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86128E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2274 | likely_benign | 0.1883 | benign | -0.54 | Destabilizing | 0.964 | D | 0.581 | neutral | None | None | None | None | I |
S/C | 0.1732 | likely_benign | 0.1675 | benign | -0.365 | Destabilizing | 0.135 | N | 0.467 | neutral | N | 0.486435574 | None | None | I |
S/D | 0.9559 | likely_pathogenic | 0.9523 | pathogenic | -0.162 | Destabilizing | 0.993 | D | 0.669 | neutral | None | None | None | None | I |
S/E | 0.9485 | likely_pathogenic | 0.9553 | pathogenic | -0.217 | Destabilizing | 0.993 | D | 0.668 | neutral | None | None | None | None | I |
S/F | 0.5793 | likely_pathogenic | 0.6126 | pathogenic | -0.922 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | I |
S/G | 0.3885 | ambiguous | 0.2637 | benign | -0.724 | Destabilizing | 0.99 | D | 0.62 | neutral | N | 0.472026425 | None | None | I |
S/H | 0.7612 | likely_pathogenic | 0.7922 | pathogenic | -1.277 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
S/I | 0.6478 | likely_pathogenic | 0.6442 | pathogenic | -0.175 | Destabilizing | 0.994 | D | 0.701 | prob.neutral | D | 0.602591385 | None | None | I |
S/K | 0.9766 | likely_pathogenic | 0.9816 | pathogenic | -0.644 | Destabilizing | 0.993 | D | 0.667 | neutral | None | None | None | None | I |
S/L | 0.2712 | likely_benign | 0.3007 | benign | -0.175 | Destabilizing | 0.985 | D | 0.654 | neutral | None | None | None | None | I |
S/M | 0.4767 | ambiguous | 0.4987 | ambiguous | 0.195 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
S/N | 0.5986 | likely_pathogenic | 0.6007 | pathogenic | -0.459 | Destabilizing | 0.99 | D | 0.689 | prob.neutral | D | 0.530865476 | None | None | I |
S/P | 0.9933 | likely_pathogenic | 0.9904 | pathogenic | -0.265 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
S/Q | 0.8726 | likely_pathogenic | 0.8867 | pathogenic | -0.717 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
S/R | 0.969 | likely_pathogenic | 0.9706 | pathogenic | -0.456 | Destabilizing | 0.997 | D | 0.645 | neutral | D | 0.548217803 | None | None | I |
S/T | 0.2777 | likely_benign | 0.2868 | benign | -0.525 | Destabilizing | 0.4 | N | 0.438 | neutral | N | 0.480107017 | None | None | I |
S/V | 0.5891 | likely_pathogenic | 0.5964 | pathogenic | -0.265 | Destabilizing | 0.985 | D | 0.691 | prob.neutral | None | None | None | None | I |
S/W | 0.8362 | likely_pathogenic | 0.8629 | pathogenic | -0.886 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
S/Y | 0.5636 | ambiguous | 0.6317 | pathogenic | -0.626 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.