Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16888 | 50887;50888;50889 | chr2:178611567;178611566;178611565 | chr2:179476294;179476293;179476292 |
N2AB | 15247 | 45964;45965;45966 | chr2:178611567;178611566;178611565 | chr2:179476294;179476293;179476292 |
N2A | 14320 | 43183;43184;43185 | chr2:178611567;178611566;178611565 | chr2:179476294;179476293;179476292 |
N2B | 7823 | 23692;23693;23694 | chr2:178611567;178611566;178611565 | chr2:179476294;179476293;179476292 |
Novex-1 | 7948 | 24067;24068;24069 | chr2:178611567;178611566;178611565 | chr2:179476294;179476293;179476292 |
Novex-2 | 8015 | 24268;24269;24270 | chr2:178611567;178611566;178611565 | chr2:179476294;179476293;179476292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.896 | N | 0.654 | 0.409 | 0.289098819767 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
H/Y | None | None | 0.995 | N | 0.653 | 0.312 | 0.342865806769 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8303 | likely_pathogenic | 0.8188 | pathogenic | -1.679 | Destabilizing | 0.919 | D | 0.663 | neutral | None | None | None | None | N |
H/C | 0.4992 | ambiguous | 0.5019 | ambiguous | -1.118 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
H/D | 0.807 | likely_pathogenic | 0.8426 | pathogenic | -1.64 | Destabilizing | 0.811 | D | 0.637 | neutral | N | 0.461441129 | None | None | N |
H/E | 0.8381 | likely_pathogenic | 0.8519 | pathogenic | -1.484 | Destabilizing | 0.919 | D | 0.627 | neutral | None | None | None | None | N |
H/F | 0.513 | ambiguous | 0.5065 | ambiguous | 0.033 | Stabilizing | 0.996 | D | 0.755 | deleterious | None | None | None | None | N |
H/G | 0.9282 | likely_pathogenic | 0.9326 | pathogenic | -2.042 | Highly Destabilizing | 0.851 | D | 0.663 | neutral | None | None | None | None | N |
H/I | 0.5858 | likely_pathogenic | 0.552 | ambiguous | -0.623 | Destabilizing | 0.988 | D | 0.793 | deleterious | None | None | None | None | N |
H/K | 0.9222 | likely_pathogenic | 0.9146 | pathogenic | -1.533 | Destabilizing | 0.919 | D | 0.67 | neutral | None | None | None | None | N |
H/L | 0.3273 | likely_benign | 0.3152 | benign | -0.623 | Destabilizing | 0.984 | D | 0.739 | prob.delet. | N | 0.45930798 | None | None | N |
H/M | 0.7351 | likely_pathogenic | 0.723 | pathogenic | -0.871 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
H/N | 0.2555 | likely_benign | 0.2672 | benign | -1.829 | Destabilizing | 0.011 | N | 0.401 | neutral | N | 0.470016679 | None | None | N |
H/P | 0.9749 | likely_pathogenic | 0.9684 | pathogenic | -0.963 | Destabilizing | 0.995 | D | 0.732 | prob.delet. | D | 0.547806723 | None | None | N |
H/Q | 0.6615 | likely_pathogenic | 0.6565 | pathogenic | -1.421 | Destabilizing | 0.984 | D | 0.659 | neutral | N | 0.466055256 | None | None | N |
H/R | 0.7628 | likely_pathogenic | 0.7524 | pathogenic | -1.869 | Destabilizing | 0.896 | D | 0.654 | neutral | N | 0.458321952 | None | None | N |
H/S | 0.6257 | likely_pathogenic | 0.6343 | pathogenic | -1.924 | Destabilizing | 0.851 | D | 0.637 | neutral | None | None | None | None | N |
H/T | 0.7112 | likely_pathogenic | 0.6977 | pathogenic | -1.669 | Destabilizing | 0.919 | D | 0.687 | prob.neutral | None | None | None | None | N |
H/V | 0.5819 | likely_pathogenic | 0.5454 | ambiguous | -0.963 | Destabilizing | 0.988 | D | 0.755 | deleterious | None | None | None | None | N |
H/W | 0.6324 | likely_pathogenic | 0.6958 | pathogenic | 0.369 | Stabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
H/Y | 0.2057 | likely_benign | 0.2249 | benign | 0.275 | Stabilizing | 0.995 | D | 0.653 | neutral | N | 0.472579732 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.