Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16893 | 50902;50903;50904 | chr2:178611552;178611551;178611550 | chr2:179476279;179476278;179476277 |
N2AB | 15252 | 45979;45980;45981 | chr2:178611552;178611551;178611550 | chr2:179476279;179476278;179476277 |
N2A | 14325 | 43198;43199;43200 | chr2:178611552;178611551;178611550 | chr2:179476279;179476278;179476277 |
N2B | 7828 | 23707;23708;23709 | chr2:178611552;178611551;178611550 | chr2:179476279;179476278;179476277 |
Novex-1 | 7953 | 24082;24083;24084 | chr2:178611552;178611551;178611550 | chr2:179476279;179476278;179476277 |
Novex-2 | 8020 | 24283;24284;24285 | chr2:178611552;178611551;178611550 | chr2:179476279;179476278;179476277 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.051 | N | 0.203 | 0.186 | 0.16115917748 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0837 | likely_benign | 0.0855 | benign | -1.861 | Destabilizing | 0.051 | N | 0.203 | neutral | N | 0.451021006 | None | None | N |
P/C | 0.7038 | likely_pathogenic | 0.7167 | pathogenic | -1.106 | Destabilizing | 0.998 | D | 0.55 | neutral | None | None | None | None | N |
P/D | 0.6749 | likely_pathogenic | 0.6163 | pathogenic | -2.135 | Highly Destabilizing | 0.728 | D | 0.428 | neutral | None | None | None | None | N |
P/E | 0.2919 | likely_benign | 0.2582 | benign | -2.067 | Highly Destabilizing | 0.007 | N | 0.18 | neutral | None | None | None | None | N |
P/F | 0.738 | likely_pathogenic | 0.7226 | pathogenic | -1.351 | Destabilizing | 0.991 | D | 0.553 | neutral | None | None | None | None | N |
P/G | 0.5118 | ambiguous | 0.4878 | ambiguous | -2.263 | Highly Destabilizing | 0.842 | D | 0.457 | neutral | None | None | None | None | N |
P/H | 0.3608 | ambiguous | 0.3317 | benign | -1.994 | Destabilizing | 0.974 | D | 0.509 | neutral | None | None | None | None | N |
P/I | 0.431 | ambiguous | 0.436 | ambiguous | -0.809 | Destabilizing | 0.974 | D | 0.557 | neutral | None | None | None | None | N |
P/K | 0.5489 | ambiguous | 0.4737 | ambiguous | -1.612 | Destabilizing | 0.728 | D | 0.432 | neutral | None | None | None | None | N |
P/L | 0.156 | likely_benign | 0.152 | benign | -0.809 | Destabilizing | 0.801 | D | 0.499 | neutral | N | 0.465157423 | None | None | N |
P/M | 0.3747 | ambiguous | 0.393 | ambiguous | -0.5 | Destabilizing | 0.998 | D | 0.497 | neutral | None | None | None | None | N |
P/N | 0.5232 | ambiguous | 0.5119 | ambiguous | -1.491 | Destabilizing | 0.949 | D | 0.491 | neutral | None | None | None | None | N |
P/Q | 0.1986 | likely_benign | 0.1887 | benign | -1.571 | Destabilizing | 0.669 | D | 0.443 | neutral | N | 0.437244903 | None | None | N |
P/R | 0.379 | ambiguous | 0.3309 | benign | -1.16 | Destabilizing | 0.934 | D | 0.493 | neutral | N | 0.443901003 | None | None | N |
P/S | 0.1735 | likely_benign | 0.1719 | benign | -2.004 | Highly Destabilizing | 0.669 | D | 0.422 | neutral | N | 0.445119111 | None | None | N |
P/T | 0.1318 | likely_benign | 0.1332 | benign | -1.825 | Destabilizing | 0.801 | D | 0.419 | neutral | N | 0.437970399 | None | None | N |
P/V | 0.2691 | likely_benign | 0.2773 | benign | -1.128 | Destabilizing | 0.842 | D | 0.476 | neutral | None | None | None | None | N |
P/W | 0.8766 | likely_pathogenic | 0.8615 | pathogenic | -1.732 | Destabilizing | 0.998 | D | 0.614 | neutral | None | None | None | None | N |
P/Y | 0.7341 | likely_pathogenic | 0.7115 | pathogenic | -1.417 | Destabilizing | 0.991 | D | 0.56 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.