Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16900 | 50923;50924;50925 | chr2:178611531;178611530;178611529 | chr2:179476258;179476257;179476256 |
N2AB | 15259 | 46000;46001;46002 | chr2:178611531;178611530;178611529 | chr2:179476258;179476257;179476256 |
N2A | 14332 | 43219;43220;43221 | chr2:178611531;178611530;178611529 | chr2:179476258;179476257;179476256 |
N2B | 7835 | 23728;23729;23730 | chr2:178611531;178611530;178611529 | chr2:179476258;179476257;179476256 |
Novex-1 | 7960 | 24103;24104;24105 | chr2:178611531;178611530;178611529 | chr2:179476258;179476257;179476256 |
Novex-2 | 8027 | 24304;24305;24306 | chr2:178611531;178611530;178611529 | chr2:179476258;179476257;179476256 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.985 | N | 0.514 | 0.344 | 0.41921206133 | gnomAD-4.0.0 | 6.84504E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52423E-05 | None | 0 | 0 | 0 | 0 | 0 |
M/V | rs2056323047 | None | 0.985 | N | 0.411 | 0.356 | 0.383256108077 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/V | rs2056323047 | None | 0.985 | N | 0.411 | 0.356 | 0.383256108077 | gnomAD-4.0.0 | 6.57929E-06 | None | None | None | None | I | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7079 | likely_pathogenic | 0.7617 | pathogenic | -1.778 | Destabilizing | 0.989 | D | 0.518 | neutral | None | None | None | None | I |
M/C | 0.8025 | likely_pathogenic | 0.8682 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.573 | neutral | None | None | None | None | I |
M/D | 0.926 | likely_pathogenic | 0.9431 | pathogenic | -0.606 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | I |
M/E | 0.6576 | likely_pathogenic | 0.6979 | pathogenic | -0.584 | Destabilizing | 0.999 | D | 0.509 | neutral | None | None | None | None | I |
M/F | 0.443 | ambiguous | 0.5185 | ambiguous | -0.777 | Destabilizing | 0.999 | D | 0.48 | neutral | None | None | None | None | I |
M/G | 0.8327 | likely_pathogenic | 0.8721 | pathogenic | -2.068 | Highly Destabilizing | 0.995 | D | 0.523 | neutral | None | None | None | None | I |
M/H | 0.6686 | likely_pathogenic | 0.6977 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | I |
M/I | 0.5167 | ambiguous | 0.5387 | ambiguous | -1.03 | Destabilizing | 0.985 | D | 0.514 | neutral | N | 0.459778709 | None | None | I |
M/K | 0.3767 | ambiguous | 0.4048 | ambiguous | -0.671 | Destabilizing | 0.994 | D | 0.513 | neutral | N | 0.459795224 | None | None | I |
M/L | 0.1746 | likely_benign | 0.1806 | benign | -1.03 | Destabilizing | 0.927 | D | 0.239 | neutral | N | 0.452242206 | None | None | I |
M/N | 0.6661 | likely_pathogenic | 0.7078 | pathogenic | -0.511 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | I |
M/P | 0.9842 | likely_pathogenic | 0.984 | pathogenic | -1.254 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | I |
M/Q | 0.3122 | likely_benign | 0.3557 | ambiguous | -0.616 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | I |
M/R | 0.4319 | ambiguous | 0.4497 | ambiguous | -0.073 | Destabilizing | 0.998 | D | 0.526 | neutral | N | 0.469351101 | None | None | I |
M/S | 0.6741 | likely_pathogenic | 0.7234 | pathogenic | -1.091 | Destabilizing | 0.995 | D | 0.491 | neutral | None | None | None | None | I |
M/T | 0.5463 | ambiguous | 0.5743 | pathogenic | -0.967 | Destabilizing | 0.994 | D | 0.514 | neutral | N | 0.455230888 | None | None | I |
M/V | 0.1813 | likely_benign | 0.188 | benign | -1.254 | Destabilizing | 0.985 | D | 0.411 | neutral | N | 0.448378468 | None | None | I |
M/W | 0.7566 | likely_pathogenic | 0.805 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | I |
M/Y | 0.6872 | likely_pathogenic | 0.7591 | pathogenic | -0.747 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.