Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16904 | 50935;50936;50937 | chr2:178611519;178611518;178611517 | chr2:179476246;179476245;179476244 |
N2AB | 15263 | 46012;46013;46014 | chr2:178611519;178611518;178611517 | chr2:179476246;179476245;179476244 |
N2A | 14336 | 43231;43232;43233 | chr2:178611519;178611518;178611517 | chr2:179476246;179476245;179476244 |
N2B | 7839 | 23740;23741;23742 | chr2:178611519;178611518;178611517 | chr2:179476246;179476245;179476244 |
Novex-1 | 7964 | 24115;24116;24117 | chr2:178611519;178611518;178611517 | chr2:179476246;179476245;179476244 |
Novex-2 | 8031 | 24316;24317;24318 | chr2:178611519;178611518;178611517 | chr2:179476246;179476245;179476244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | N | 0.727 | 0.435 | 0.392395365052 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0977 | likely_benign | 0.0929 | benign | -0.173 | Destabilizing | 0.997 | D | 0.44 | neutral | N | 0.466367 | None | None | I |
S/C | 0.2124 | likely_benign | 0.2017 | benign | -0.362 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.5417299 | None | None | I |
S/D | 0.6622 | likely_pathogenic | 0.612 | pathogenic | 0.003 | Stabilizing | 0.999 | D | 0.592 | neutral | None | None | None | None | I |
S/E | 0.7164 | likely_pathogenic | 0.6956 | pathogenic | -0.108 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | I |
S/F | 0.4789 | ambiguous | 0.4508 | ambiguous | -0.884 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.482538257 | None | None | I |
S/G | 0.1257 | likely_benign | 0.138 | benign | -0.227 | Destabilizing | 0.999 | D | 0.474 | neutral | None | None | None | None | I |
S/H | 0.5448 | ambiguous | 0.5561 | ambiguous | -0.592 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
S/I | 0.344 | ambiguous | 0.3472 | ambiguous | -0.164 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
S/K | 0.8554 | likely_pathogenic | 0.8396 | pathogenic | -0.437 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | I |
S/L | 0.1895 | likely_benign | 0.1718 | benign | -0.164 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
S/M | 0.3316 | likely_benign | 0.3433 | ambiguous | -0.106 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
S/N | 0.2151 | likely_benign | 0.2124 | benign | -0.187 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | I |
S/P | 0.1901 | likely_benign | 0.1819 | benign | -0.141 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.468687668 | None | None | I |
S/Q | 0.6127 | likely_pathogenic | 0.6418 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
S/R | 0.8232 | likely_pathogenic | 0.8061 | pathogenic | -0.176 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
S/T | 0.1266 | likely_benign | 0.116 | benign | -0.292 | Destabilizing | 0.999 | D | 0.458 | neutral | N | 0.459723663 | None | None | I |
S/V | 0.3127 | likely_benign | 0.314 | benign | -0.141 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
S/W | 0.601 | likely_pathogenic | 0.6201 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
S/Y | 0.4052 | ambiguous | 0.3985 | ambiguous | -0.651 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | N | 0.476369479 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.