Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1690550938;50939;50940 chr2:178611516;178611515;178611514chr2:179476243;179476242;179476241
N2AB1526446015;46016;46017 chr2:178611516;178611515;178611514chr2:179476243;179476242;179476241
N2A1433743234;43235;43236 chr2:178611516;178611515;178611514chr2:179476243;179476242;179476241
N2B784023743;23744;23745 chr2:178611516;178611515;178611514chr2:179476243;179476242;179476241
Novex-1796524118;24119;24120 chr2:178611516;178611515;178611514chr2:179476243;179476242;179476241
Novex-2803224319;24320;24321 chr2:178611516;178611515;178611514chr2:179476243;179476242;179476241
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Fn3-11
  • Domain position: 54
  • Structural Position: 72
  • Q(SASA): 0.6356
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs267599049 -0.287 1.0 D 0.776 0.412 0.642361509819 gnomAD-2.1.1 5.66E-05 None None None None I None 6.47E-05 0 None 0 5.6E-05 None 2.61523E-04 None 0 3.59E-05 0
R/C rs267599049 -0.287 1.0 D 0.776 0.412 0.642361509819 gnomAD-3.1.2 6.58E-06 None None None None I None 2.42E-05 0 0 0 0 None 0 0 0 0 0
R/C rs267599049 -0.287 1.0 D 0.776 0.412 0.642361509819 gnomAD-4.0.0 1.86013E-05 None None None None I None 1.33697E-05 0 None 0 1.11792E-04 None 0 0 5.9358E-06 1.64719E-04 3.20441E-05
R/H rs191539637 -0.617 1.0 N 0.754 0.386 None gnomAD-2.1.1 4.70117E-04 None None None None I None 2.06902E-04 5.66E-05 None 2.42483E-03 3.09725E-04 None 3.27E-05 None 9.19559E-04 4.96885E-04 8.45309E-04
R/H rs191539637 -0.617 1.0 N 0.754 0.386 None gnomAD-3.1.2 5.26794E-04 None None None None I None 9.66E-05 6.56E-05 0 2.88184E-03 3.9032E-04 None 1.69907E-03 0 6.62681E-04 0 0
R/H rs191539637 -0.617 1.0 N 0.754 0.386 None 1000 genomes 3.99361E-04 None None None None I None 0 1.4E-03 None None 1E-03 0 None None None 0 None
R/H rs191539637 -0.617 1.0 N 0.754 0.386 None gnomAD-4.0.0 3.66426E-04 None None None None I None 1.20122E-04 6.672E-05 None 3.07578E-03 1.34192E-04 None 1.21913E-03 0 3.26476E-04 1.09818E-05 2.72296E-04
R/P rs191539637 -0.225 1.0 N 0.691 0.387 0.364730456448 gnomAD-2.1.1 4.04E-06 None None None None I None 0 0 None 0 0 None 3.27E-05 None 0 0 0
R/P rs191539637 -0.225 1.0 N 0.691 0.387 0.364730456448 gnomAD-4.0.0 1.36902E-06 None None None None I None 0 0 None 0 0 None 0 0 0 1.15958E-05 1.65782E-05
R/S rs267599049 0.111 1.0 N 0.672 0.421 0.31501682445 gnomAD-2.1.1 4.04E-06 None None None None I None 0 0 None 0 0 None 3.27E-05 None 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.7337 likely_pathogenic 0.7886 pathogenic 0.044 Stabilizing 0.999 D 0.611 neutral None None None None I
R/C 0.3671 ambiguous 0.4072 ambiguous -0.14 Destabilizing 1.0 D 0.776 deleterious D 0.550888858 None None I
R/D 0.8962 likely_pathogenic 0.9195 pathogenic -0.26 Destabilizing 1.0 D 0.699 prob.neutral None None None None I
R/E 0.7166 likely_pathogenic 0.7464 pathogenic -0.217 Destabilizing 0.999 D 0.635 neutral None None None None I
R/F 0.804 likely_pathogenic 0.836 pathogenic -0.257 Destabilizing 1.0 D 0.741 deleterious None None None None I
R/G 0.6123 likely_pathogenic 0.6733 pathogenic -0.107 Destabilizing 1.0 D 0.616 neutral N 0.440274827 None None I
R/H 0.2049 likely_benign 0.2204 benign -0.635 Destabilizing 1.0 D 0.754 deleterious N 0.48132334 None None I
R/I 0.5466 ambiguous 0.6151 pathogenic 0.397 Stabilizing 1.0 D 0.741 deleterious None None None None I
R/K 0.1908 likely_benign 0.1872 benign -0.094 Destabilizing 0.998 D 0.53 neutral None None None None I
R/L 0.487 ambiguous 0.5524 ambiguous 0.397 Stabilizing 1.0 D 0.616 neutral N 0.475267477 None None I
R/M 0.6028 likely_pathogenic 0.6665 pathogenic -0.008 Destabilizing 1.0 D 0.728 prob.delet. None None None None I
R/N 0.8329 likely_pathogenic 0.8648 pathogenic 0.062 Stabilizing 1.0 D 0.716 prob.delet. None None None None I
R/P 0.9343 likely_pathogenic 0.9365 pathogenic 0.298 Stabilizing 1.0 D 0.691 prob.neutral N 0.470339484 None None I
R/Q 0.2032 likely_benign 0.2217 benign -0.004 Destabilizing 1.0 D 0.708 prob.delet. None None None None I
R/S 0.7866 likely_pathogenic 0.8289 pathogenic -0.148 Destabilizing 1.0 D 0.672 neutral N 0.460085859 None None I
R/T 0.5906 likely_pathogenic 0.6557 pathogenic 0.005 Stabilizing 1.0 D 0.671 neutral None None None None I
R/V 0.6281 likely_pathogenic 0.6807 pathogenic 0.298 Stabilizing 1.0 D 0.715 prob.delet. None None None None I
R/W 0.4137 ambiguous 0.4724 ambiguous -0.415 Destabilizing 1.0 D 0.789 deleterious None None None None I
R/Y 0.6665 likely_pathogenic 0.7138 pathogenic -0.006 Destabilizing 1.0 D 0.726 prob.delet. None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.