Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16912 | 50959;50960;50961 | chr2:178611495;178611494;178611493 | chr2:179476222;179476221;179476220 |
N2AB | 15271 | 46036;46037;46038 | chr2:178611495;178611494;178611493 | chr2:179476222;179476221;179476220 |
N2A | 14344 | 43255;43256;43257 | chr2:178611495;178611494;178611493 | chr2:179476222;179476221;179476220 |
N2B | 7847 | 23764;23765;23766 | chr2:178611495;178611494;178611493 | chr2:179476222;179476221;179476220 |
Novex-1 | 7972 | 24139;24140;24141 | chr2:178611495;178611494;178611493 | chr2:179476222;179476221;179476220 |
Novex-2 | 8039 | 24340;24341;24342 | chr2:178611495;178611494;178611493 | chr2:179476222;179476221;179476220 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs2056317849 | None | 0.009 | N | 0.491 | 0.257 | 0.455722563999 | gnomAD-4.0.0 | 3.42256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5991E-06 | 0 | 1.65777E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8429 | likely_pathogenic | 0.914 | pathogenic | -2.32 | Highly Destabilizing | 0.25 | N | 0.511 | neutral | None | None | None | None | N |
F/C | 0.3523 | ambiguous | 0.4639 | ambiguous | -1.719 | Destabilizing | 0.009 | N | 0.491 | neutral | N | 0.484001765 | None | None | N |
F/D | 0.959 | likely_pathogenic | 0.9849 | pathogenic | -2.29 | Highly Destabilizing | 0.972 | D | 0.626 | neutral | None | None | None | None | N |
F/E | 0.9614 | likely_pathogenic | 0.9837 | pathogenic | -2.114 | Highly Destabilizing | 0.92 | D | 0.618 | neutral | None | None | None | None | N |
F/G | 0.8674 | likely_pathogenic | 0.9419 | pathogenic | -2.706 | Highly Destabilizing | 0.766 | D | 0.578 | neutral | None | None | None | None | N |
F/H | 0.7163 | likely_pathogenic | 0.8271 | pathogenic | -1.078 | Destabilizing | 0.85 | D | 0.513 | neutral | None | None | None | None | N |
F/I | 0.6091 | likely_pathogenic | 0.685 | pathogenic | -1.095 | Destabilizing | 0.549 | D | 0.407 | neutral | N | 0.475175124 | None | None | N |
F/K | 0.9562 | likely_pathogenic | 0.9798 | pathogenic | -2.071 | Highly Destabilizing | 0.92 | D | 0.618 | neutral | None | None | None | None | N |
F/L | 0.9329 | likely_pathogenic | 0.9502 | pathogenic | -1.095 | Destabilizing | 0.201 | N | 0.426 | neutral | N | 0.476482206 | None | None | N |
F/M | 0.7555 | likely_pathogenic | 0.8305 | pathogenic | -0.902 | Destabilizing | 0.972 | D | 0.414 | neutral | None | None | None | None | N |
F/N | 0.8642 | likely_pathogenic | 0.9368 | pathogenic | -2.54 | Highly Destabilizing | 0.92 | D | 0.628 | neutral | None | None | None | None | N |
F/P | 0.998 | likely_pathogenic | 0.9989 | pathogenic | -1.508 | Destabilizing | 0.972 | D | 0.651 | neutral | None | None | None | None | N |
F/Q | 0.9185 | likely_pathogenic | 0.9608 | pathogenic | -2.451 | Highly Destabilizing | 0.92 | D | 0.654 | neutral | None | None | None | None | N |
F/R | 0.9223 | likely_pathogenic | 0.9564 | pathogenic | -1.616 | Destabilizing | 0.92 | D | 0.629 | neutral | None | None | None | None | N |
F/S | 0.8399 | likely_pathogenic | 0.9104 | pathogenic | -3.174 | Highly Destabilizing | 0.549 | D | 0.529 | neutral | N | 0.509573125 | None | None | N |
F/T | 0.8855 | likely_pathogenic | 0.9431 | pathogenic | -2.887 | Highly Destabilizing | 0.617 | D | 0.547 | neutral | None | None | None | None | N |
F/V | 0.5542 | ambiguous | 0.6463 | pathogenic | -1.508 | Destabilizing | 0.549 | D | 0.462 | neutral | N | 0.473096063 | None | None | N |
F/W | 0.4989 | ambiguous | 0.6226 | pathogenic | -0.237 | Destabilizing | 0.92 | D | 0.425 | neutral | None | None | None | None | N |
F/Y | 0.0897 | likely_benign | 0.1078 | benign | -0.571 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.420149073 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.