Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16917 | 50974;50975;50976 | chr2:178611480;178611479;178611478 | chr2:179476207;179476206;179476205 |
N2AB | 15276 | 46051;46052;46053 | chr2:178611480;178611479;178611478 | chr2:179476207;179476206;179476205 |
N2A | 14349 | 43270;43271;43272 | chr2:178611480;178611479;178611478 | chr2:179476207;179476206;179476205 |
N2B | 7852 | 23779;23780;23781 | chr2:178611480;178611479;178611478 | chr2:179476207;179476206;179476205 |
Novex-1 | 7977 | 24154;24155;24156 | chr2:178611480;178611479;178611478 | chr2:179476207;179476206;179476205 |
Novex-2 | 8044 | 24355;24356;24357 | chr2:178611480;178611479;178611478 | chr2:179476207;179476206;179476205 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | None | None | 1.0 | N | 0.766 | 0.46 | 0.445107144611 | gnomAD-4.0.0 | 1.59294E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86131E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2026 | likely_benign | 0.2573 | benign | -0.318 | Destabilizing | 0.998 | D | 0.532 | neutral | D | 0.631710727 | None | None | N |
G/C | 0.39 | ambiguous | 0.4935 | ambiguous | -0.777 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.649821746 | None | None | N |
G/D | 0.3963 | ambiguous | 0.4446 | ambiguous | -0.907 | Destabilizing | 1.0 | D | 0.766 | deleterious | N | 0.481450091 | None | None | N |
G/E | 0.4869 | ambiguous | 0.5586 | ambiguous | -1.002 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/F | 0.7523 | likely_pathogenic | 0.8501 | pathogenic | -0.881 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
G/H | 0.7075 | likely_pathogenic | 0.7842 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
G/I | 0.4974 | ambiguous | 0.6388 | pathogenic | -0.254 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/K | 0.8191 | likely_pathogenic | 0.8645 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
G/L | 0.6523 | likely_pathogenic | 0.774 | pathogenic | -0.254 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
G/M | 0.5917 | likely_pathogenic | 0.7157 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
G/N | 0.3519 | ambiguous | 0.4337 | ambiguous | -0.591 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
G/P | 0.9071 | likely_pathogenic | 0.95 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
G/Q | 0.6667 | likely_pathogenic | 0.7469 | pathogenic | -0.794 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
G/R | 0.7656 | likely_pathogenic | 0.8007 | pathogenic | -0.55 | Destabilizing | 1.0 | D | 0.772 | deleterious | N | 0.495787004 | None | None | N |
G/S | 0.1764 | likely_benign | 0.1893 | benign | -0.701 | Destabilizing | 0.991 | D | 0.528 | neutral | D | 0.528236334 | None | None | N |
G/T | 0.2574 | likely_benign | 0.3174 | benign | -0.722 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
G/V | 0.3644 | ambiguous | 0.4703 | ambiguous | -0.241 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.709633408 | None | None | N |
G/W | 0.6841 | likely_pathogenic | 0.8018 | pathogenic | -1.13 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
G/Y | 0.6354 | likely_pathogenic | 0.7698 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.