Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16918 | 50977;50978;50979 | chr2:178611477;178611476;178611475 | chr2:179476204;179476203;179476202 |
N2AB | 15277 | 46054;46055;46056 | chr2:178611477;178611476;178611475 | chr2:179476204;179476203;179476202 |
N2A | 14350 | 43273;43274;43275 | chr2:178611477;178611476;178611475 | chr2:179476204;179476203;179476202 |
N2B | 7853 | 23782;23783;23784 | chr2:178611477;178611476;178611475 | chr2:179476204;179476203;179476202 |
Novex-1 | 7978 | 24157;24158;24159 | chr2:178611477;178611476;178611475 | chr2:179476204;179476203;179476202 |
Novex-2 | 8045 | 24358;24359;24360 | chr2:178611477;178611476;178611475 | chr2:179476204;179476203;179476202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs765405714 | -2.026 | 0.104 | D | 0.694 | 0.321 | 0.45349784317 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/A | rs765405714 | -2.026 | 0.104 | D | 0.694 | 0.321 | 0.45349784317 | gnomAD-4.0.0 | 1.59293E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
V/G | None | None | 0.667 | D | 0.855 | 0.454 | 0.655021911717 | gnomAD-4.0.0 | 1.59293E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8613E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6596 | likely_pathogenic | 0.7657 | pathogenic | -1.804 | Destabilizing | 0.104 | N | 0.694 | prob.neutral | D | 0.539615967 | None | None | N |
V/C | 0.8873 | likely_pathogenic | 0.9428 | pathogenic | -1.267 | Destabilizing | 0.968 | D | 0.826 | deleterious | None | None | None | None | N |
V/D | 0.9742 | likely_pathogenic | 0.982 | pathogenic | -1.764 | Destabilizing | 0.667 | D | 0.888 | deleterious | D | 0.581234271 | None | None | N |
V/E | 0.9517 | likely_pathogenic | 0.9645 | pathogenic | -1.679 | Destabilizing | 0.726 | D | 0.85 | deleterious | None | None | None | None | N |
V/F | 0.5634 | ambiguous | 0.5874 | pathogenic | -1.246 | Destabilizing | 0.002 | N | 0.641 | neutral | D | 0.53812432 | None | None | N |
V/G | 0.7972 | likely_pathogenic | 0.8701 | pathogenic | -2.221 | Highly Destabilizing | 0.667 | D | 0.855 | deleterious | D | 0.582490523 | None | None | N |
V/H | 0.9831 | likely_pathogenic | 0.9891 | pathogenic | -1.769 | Destabilizing | 0.968 | D | 0.891 | deleterious | None | None | None | None | N |
V/I | 0.0807 | likely_benign | 0.0737 | benign | -0.716 | Destabilizing | None | N | 0.357 | neutral | N | 0.46823939 | None | None | N |
V/K | 0.9647 | likely_pathogenic | 0.9764 | pathogenic | -1.56 | Destabilizing | 0.726 | D | 0.85 | deleterious | None | None | None | None | N |
V/L | 0.3625 | ambiguous | 0.3837 | ambiguous | -0.716 | Destabilizing | 0.009 | N | 0.566 | neutral | N | 0.31884379 | None | None | N |
V/M | 0.3935 | ambiguous | 0.4111 | ambiguous | -0.576 | Destabilizing | 0.567 | D | 0.735 | prob.delet. | None | None | None | None | N |
V/N | 0.9262 | likely_pathogenic | 0.9476 | pathogenic | -1.517 | Destabilizing | 0.89 | D | 0.886 | deleterious | None | None | None | None | N |
V/P | 0.9423 | likely_pathogenic | 0.9594 | pathogenic | -1.045 | Destabilizing | 0.89 | D | 0.859 | deleterious | None | None | None | None | N |
V/Q | 0.9539 | likely_pathogenic | 0.9688 | pathogenic | -1.567 | Destabilizing | 0.89 | D | 0.867 | deleterious | None | None | None | None | N |
V/R | 0.9457 | likely_pathogenic | 0.965 | pathogenic | -1.118 | Destabilizing | 0.726 | D | 0.883 | deleterious | None | None | None | None | N |
V/S | 0.8518 | likely_pathogenic | 0.906 | pathogenic | -2.115 | Highly Destabilizing | 0.726 | D | 0.828 | deleterious | None | None | None | None | N |
V/T | 0.6564 | likely_pathogenic | 0.7664 | pathogenic | -1.901 | Destabilizing | 0.272 | N | 0.727 | prob.delet. | None | None | None | None | N |
V/W | 0.9816 | likely_pathogenic | 0.9882 | pathogenic | -1.551 | Destabilizing | 0.968 | D | 0.877 | deleterious | None | None | None | None | N |
V/Y | 0.9419 | likely_pathogenic | 0.959 | pathogenic | -1.223 | Destabilizing | 0.396 | N | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.