Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16919 | 50980;50981;50982 | chr2:178611474;178611473;178611472 | chr2:179476201;179476200;179476199 |
N2AB | 15278 | 46057;46058;46059 | chr2:178611474;178611473;178611472 | chr2:179476201;179476200;179476199 |
N2A | 14351 | 43276;43277;43278 | chr2:178611474;178611473;178611472 | chr2:179476201;179476200;179476199 |
N2B | 7854 | 23785;23786;23787 | chr2:178611474;178611473;178611472 | chr2:179476201;179476200;179476199 |
Novex-1 | 7979 | 24160;24161;24162 | chr2:178611474;178611473;178611472 | chr2:179476201;179476200;179476199 |
Novex-2 | 8046 | 24361;24362;24363 | chr2:178611474;178611473;178611472 | chr2:179476201;179476200;179476199 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs757845759 | None | 0.977 | N | 0.414 | 0.233 | 0.465038187318 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
V/F | rs2056315018 | None | 0.993 | N | 0.745 | 0.295 | 0.511677802314 | gnomAD-4.0.0 | 1.36905E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79955E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2367 | likely_benign | 0.2799 | benign | -0.87 | Destabilizing | 0.977 | D | 0.414 | neutral | N | 0.478689221 | None | None | N |
V/C | 0.7481 | likely_pathogenic | 0.8357 | pathogenic | -0.805 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/D | 0.4208 | ambiguous | 0.4601 | ambiguous | -0.556 | Destabilizing | 0.999 | D | 0.755 | deleterious | N | 0.474128025 | None | None | N |
V/E | 0.2867 | likely_benign | 0.3317 | benign | -0.602 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/F | 0.2021 | likely_benign | 0.2083 | benign | -0.75 | Destabilizing | 0.993 | D | 0.745 | deleterious | N | 0.478417197 | None | None | N |
V/G | 0.3139 | likely_benign | 0.3686 | ambiguous | -1.095 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | N | 0.475792113 | None | None | N |
V/H | 0.6192 | likely_pathogenic | 0.6907 | pathogenic | -0.466 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
V/I | 0.0745 | likely_benign | 0.0798 | benign | -0.388 | Destabilizing | 0.117 | N | 0.232 | neutral | N | 0.444135903 | None | None | N |
V/K | 0.4185 | ambiguous | 0.4768 | ambiguous | -0.782 | Destabilizing | 0.998 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/L | 0.1598 | likely_benign | 0.178 | benign | -0.388 | Destabilizing | 0.898 | D | 0.377 | neutral | N | 0.467711294 | None | None | N |
V/M | 0.1518 | likely_benign | 0.1548 | benign | -0.505 | Destabilizing | 0.995 | D | 0.743 | deleterious | None | None | None | None | N |
V/N | 0.2973 | likely_benign | 0.362 | ambiguous | -0.605 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
V/P | 0.7473 | likely_pathogenic | 0.8168 | pathogenic | -0.513 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
V/Q | 0.3159 | likely_benign | 0.3896 | ambiguous | -0.774 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
V/R | 0.4454 | ambiguous | 0.5069 | ambiguous | -0.251 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
V/S | 0.2405 | likely_benign | 0.2994 | benign | -1.05 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/T | 0.2068 | likely_benign | 0.2684 | benign | -0.982 | Destabilizing | 0.983 | D | 0.629 | neutral | None | None | None | None | N |
V/W | 0.8751 | likely_pathogenic | 0.9069 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
V/Y | 0.6074 | likely_pathogenic | 0.6922 | pathogenic | -0.573 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.