Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16932 | 51019;51020;51021 | chr2:178611435;178611434;178611433 | chr2:179476162;179476161;179476160 |
N2AB | 15291 | 46096;46097;46098 | chr2:178611435;178611434;178611433 | chr2:179476162;179476161;179476160 |
N2A | 14364 | 43315;43316;43317 | chr2:178611435;178611434;178611433 | chr2:179476162;179476161;179476160 |
N2B | 7867 | 23824;23825;23826 | chr2:178611435;178611434;178611433 | chr2:179476162;179476161;179476160 |
Novex-1 | 7992 | 24199;24200;24201 | chr2:178611435;178611434;178611433 | chr2:179476162;179476161;179476160 |
Novex-2 | 8059 | 24400;24401;24402 | chr2:178611435;178611434;178611433 | chr2:179476162;179476161;179476160 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs779440152 | -1.552 | 0.999 | N | 0.584 | 0.498 | 0.244539031024 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
N/S | rs779440152 | -1.552 | 0.999 | N | 0.584 | 0.498 | 0.244539031024 | gnomAD-4.0.0 | 1.17808E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52632E-05 | 1.09806E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9879 | likely_pathogenic | 0.9979 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
N/C | 0.9203 | likely_pathogenic | 0.9803 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
N/D | 0.977 | likely_pathogenic | 0.9914 | pathogenic | -2.068 | Highly Destabilizing | 0.999 | D | 0.601 | neutral | D | 0.63965837 | None | None | N |
N/E | 0.9979 | likely_pathogenic | 0.9994 | pathogenic | -1.87 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
N/F | 0.9991 | likely_pathogenic | 0.9997 | pathogenic | -0.787 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
N/G | 0.9694 | likely_pathogenic | 0.9929 | pathogenic | -1.512 | Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
N/H | 0.9662 | likely_pathogenic | 0.9901 | pathogenic | -1.045 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.717685936 | None | None | N |
N/I | 0.9947 | likely_pathogenic | 0.9982 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.7184448 | None | None | N |
N/K | 0.9987 | likely_pathogenic | 0.9996 | pathogenic | -0.481 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.71641595 | None | None | N |
N/L | 0.9739 | likely_pathogenic | 0.9898 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
N/M | 0.9903 | likely_pathogenic | 0.9974 | pathogenic | -0.047 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
N/P | 0.9963 | likely_pathogenic | 0.9987 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
N/Q | 0.9976 | likely_pathogenic | 0.9994 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
N/R | 0.9972 | likely_pathogenic | 0.9991 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
N/S | 0.6278 | likely_pathogenic | 0.8732 | pathogenic | -1.365 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.471783339 | None | None | N |
N/T | 0.8431 | likely_pathogenic | 0.9758 | pathogenic | -1.0 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | D | 0.577581513 | None | None | N |
N/V | 0.9894 | likely_pathogenic | 0.9972 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
N/W | 0.9997 | likely_pathogenic | 0.9999 | pathogenic | -0.679 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
N/Y | 0.9928 | likely_pathogenic | 0.9971 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.796 | deleterious | D | 0.718346497 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.