Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16937 | 51034;51035;51036 | chr2:178611420;178611419;178611418 | chr2:179476147;179476146;179476145 |
N2AB | 15296 | 46111;46112;46113 | chr2:178611420;178611419;178611418 | chr2:179476147;179476146;179476145 |
N2A | 14369 | 43330;43331;43332 | chr2:178611420;178611419;178611418 | chr2:179476147;179476146;179476145 |
N2B | 7872 | 23839;23840;23841 | chr2:178611420;178611419;178611418 | chr2:179476147;179476146;179476145 |
Novex-1 | 7997 | 24214;24215;24216 | chr2:178611420;178611419;178611418 | chr2:179476147;179476146;179476145 |
Novex-2 | 8064 | 24415;24416;24417 | chr2:178611420;178611419;178611418 | chr2:179476147;179476146;179476145 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs780845171 | -1.036 | 1.0 | D | 0.791 | 0.435 | 0.306695030598 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
S/R | rs780845171 | -1.036 | 1.0 | D | 0.791 | 0.435 | 0.306695030598 | gnomAD-4.0.0 | 6.16119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 9.2773E-05 | 1.65799E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.594 | likely_pathogenic | 0.611 | pathogenic | -0.899 | Destabilizing | 0.98 | D | 0.673 | neutral | None | None | None | None | N |
S/C | 0.8467 | likely_pathogenic | 0.8794 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.75 | deleterious | D | 0.72538889 | None | None | N |
S/D | 0.9905 | likely_pathogenic | 0.9941 | pathogenic | -1.735 | Destabilizing | 0.996 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/E | 0.996 | likely_pathogenic | 0.9975 | pathogenic | -1.618 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
S/F | 0.9977 | likely_pathogenic | 0.9988 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
S/G | 0.1797 | likely_benign | 0.2128 | benign | -1.217 | Destabilizing | 0.104 | N | 0.426 | neutral | N | 0.443608299 | None | None | N |
S/H | 0.9942 | likely_pathogenic | 0.9964 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
S/I | 0.9965 | likely_pathogenic | 0.9982 | pathogenic | -0.122 | Destabilizing | 0.999 | D | 0.853 | deleterious | D | 0.724603427 | None | None | N |
S/K | 0.9994 | likely_pathogenic | 0.9997 | pathogenic | -0.944 | Destabilizing | 0.996 | D | 0.752 | deleterious | None | None | None | None | N |
S/L | 0.9794 | likely_pathogenic | 0.989 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
S/M | 0.9886 | likely_pathogenic | 0.993 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
S/N | 0.9728 | likely_pathogenic | 0.9841 | pathogenic | -1.341 | Destabilizing | 0.994 | D | 0.735 | prob.delet. | D | 0.723308633 | None | None | N |
S/P | 0.9951 | likely_pathogenic | 0.9973 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
S/Q | 0.9955 | likely_pathogenic | 0.9972 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
S/R | 0.9986 | likely_pathogenic | 0.9992 | pathogenic | -0.995 | Destabilizing | 1.0 | D | 0.791 | deleterious | D | 0.686829537 | None | None | N |
S/T | 0.8164 | likely_pathogenic | 0.8748 | pathogenic | -1.08 | Destabilizing | 0.994 | D | 0.701 | prob.neutral | D | 0.720975846 | None | None | N |
S/V | 0.9934 | likely_pathogenic | 0.9963 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
S/W | 0.9969 | likely_pathogenic | 0.9985 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
S/Y | 0.9961 | likely_pathogenic | 0.9978 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.