Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16939 | 51040;51041;51042 | chr2:178611414;178611413;178611412 | chr2:179476141;179476140;179476139 |
N2AB | 15298 | 46117;46118;46119 | chr2:178611414;178611413;178611412 | chr2:179476141;179476140;179476139 |
N2A | 14371 | 43336;43337;43338 | chr2:178611414;178611413;178611412 | chr2:179476141;179476140;179476139 |
N2B | 7874 | 23845;23846;23847 | chr2:178611414;178611413;178611412 | chr2:179476141;179476140;179476139 |
Novex-1 | 7999 | 24220;24221;24222 | chr2:178611414;178611413;178611412 | chr2:179476141;179476140;179476139 |
Novex-2 | 8066 | 24421;24422;24423 | chr2:178611414;178611413;178611412 | chr2:179476141;179476140;179476139 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1321289317 | -0.83 | 1.0 | D | 0.827 | 0.465 | 0.746050308143 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
P/L | rs1321289317 | -0.83 | 1.0 | D | 0.827 | 0.465 | 0.746050308143 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
P/S | None | None | 1.0 | D | 0.747 | 0.428 | 0.386558576397 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1575 | likely_benign | 0.4427 | ambiguous | -1.627 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.543720062 | None | None | I |
P/C | 0.8855 | likely_pathogenic | 0.9859 | pathogenic | -1.147 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
P/D | 0.9342 | likely_pathogenic | 0.9881 | pathogenic | -1.805 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
P/E | 0.8717 | likely_pathogenic | 0.973 | pathogenic | -1.834 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
P/F | 0.9009 | likely_pathogenic | 0.9914 | pathogenic | -1.413 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
P/G | 0.7457 | likely_pathogenic | 0.9478 | pathogenic | -1.892 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
P/H | 0.7805 | likely_pathogenic | 0.9687 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
P/I | 0.8505 | likely_pathogenic | 0.9707 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
P/K | 0.9438 | likely_pathogenic | 0.9874 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
P/L | 0.6685 | likely_pathogenic | 0.9082 | pathogenic | -1.002 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.618810289 | None | None | I |
P/M | 0.8455 | likely_pathogenic | 0.9727 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | I |
P/N | 0.9117 | likely_pathogenic | 0.9859 | pathogenic | -1.045 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
P/Q | 0.796 | likely_pathogenic | 0.9552 | pathogenic | -1.325 | Destabilizing | 1.0 | D | 0.788 | deleterious | D | 0.693330286 | None | None | I |
P/R | 0.8844 | likely_pathogenic | 0.9712 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.607362871 | None | None | I |
P/S | 0.4848 | ambiguous | 0.86 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.630225046 | None | None | I |
P/T | 0.5185 | ambiguous | 0.8632 | pathogenic | -1.435 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.653421975 | None | None | I |
P/V | 0.6932 | likely_pathogenic | 0.9209 | pathogenic | -1.178 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
P/W | 0.9552 | likely_pathogenic | 0.9968 | pathogenic | -1.521 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
P/Y | 0.9007 | likely_pathogenic | 0.9901 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.