Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16940 | 51043;51044;51045 | chr2:178611411;178611410;178611409 | chr2:179476138;179476137;179476136 |
N2AB | 15299 | 46120;46121;46122 | chr2:178611411;178611410;178611409 | chr2:179476138;179476137;179476136 |
N2A | 14372 | 43339;43340;43341 | chr2:178611411;178611410;178611409 | chr2:179476138;179476137;179476136 |
N2B | 7875 | 23848;23849;23850 | chr2:178611411;178611410;178611409 | chr2:179476138;179476137;179476136 |
Novex-1 | 8000 | 24223;24224;24225 | chr2:178611411;178611410;178611409 | chr2:179476138;179476137;179476136 |
Novex-2 | 8067 | 24424;24425;24426 | chr2:178611411;178611410;178611409 | chr2:179476138;179476137;179476136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 1.0 | D | 0.884 | 0.756 | 0.589372124375 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1333 | likely_benign | 0.3531 | ambiguous | -0.85 | Destabilizing | 0.997 | D | 0.856 | deleterious | D | 0.620080833 | None | None | N |
S/C | 0.2164 | likely_benign | 0.5841 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.783126503 | None | None | N |
S/D | 0.9572 | likely_pathogenic | 0.9877 | pathogenic | -1.441 | Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
S/E | 0.9643 | likely_pathogenic | 0.9905 | pathogenic | -1.323 | Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | N |
S/F | 0.9095 | likely_pathogenic | 0.9869 | pathogenic | -0.572 | Destabilizing | 1.0 | D | 0.921 | deleterious | D | 0.783126503 | None | None | N |
S/G | 0.2168 | likely_benign | 0.365 | ambiguous | -1.183 | Destabilizing | 0.999 | D | 0.897 | deleterious | None | None | None | None | N |
S/H | 0.9293 | likely_pathogenic | 0.9866 | pathogenic | -1.532 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
S/I | 0.7975 | likely_pathogenic | 0.9678 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
S/K | 0.9873 | likely_pathogenic | 0.998 | pathogenic | -0.875 | Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
S/L | 0.5392 | ambiguous | 0.8508 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
S/M | 0.7087 | likely_pathogenic | 0.92 | pathogenic | -0.123 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
S/N | 0.7894 | likely_pathogenic | 0.9292 | pathogenic | -1.215 | Destabilizing | 0.999 | D | 0.905 | deleterious | None | None | None | None | N |
S/P | 0.9748 | likely_pathogenic | 0.9915 | pathogenic | -0.269 | Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.783058568 | None | None | N |
S/Q | 0.9357 | likely_pathogenic | 0.9859 | pathogenic | -1.152 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
S/R | 0.9665 | likely_pathogenic | 0.9948 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
S/T | 0.2352 | likely_benign | 0.4467 | ambiguous | -0.977 | Destabilizing | 0.999 | D | 0.905 | deleterious | D | 0.622883572 | None | None | N |
S/V | 0.632 | likely_pathogenic | 0.9345 | pathogenic | -0.269 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
S/W | 0.9459 | likely_pathogenic | 0.9905 | pathogenic | -0.737 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
S/Y | 0.8948 | likely_pathogenic | 0.9832 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.917 | deleterious | D | 0.783058568 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.