Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16944 | 51055;51056;51057 | chr2:178611399;178611398;178611397 | chr2:179476126;179476125;179476124 |
N2AB | 15303 | 46132;46133;46134 | chr2:178611399;178611398;178611397 | chr2:179476126;179476125;179476124 |
N2A | 14376 | 43351;43352;43353 | chr2:178611399;178611398;178611397 | chr2:179476126;179476125;179476124 |
N2B | 7879 | 23860;23861;23862 | chr2:178611399;178611398;178611397 | chr2:179476126;179476125;179476124 |
Novex-1 | 8004 | 24235;24236;24237 | chr2:178611399;178611398;178611397 | chr2:179476126;179476125;179476124 |
Novex-2 | 8071 | 24436;24437;24438 | chr2:178611399;178611398;178611397 | chr2:179476126;179476125;179476124 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs758389457 | -0.204 | 0.999 | N | 0.673 | 0.391 | 0.489728331402 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/G | rs758389457 | -0.204 | 0.999 | N | 0.673 | 0.391 | 0.489728331402 | gnomAD-4.0.0 | 1.59333E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3003 | likely_benign | 0.3199 | benign | -0.524 | Destabilizing | 0.997 | D | 0.8 | deleterious | N | 0.503501469 | None | None | I |
E/C | 0.9228 | likely_pathogenic | 0.9289 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
E/D | 0.1535 | likely_benign | 0.1629 | benign | -0.6 | Destabilizing | 0.997 | D | 0.667 | prob.neutral | N | 0.465028529 | None | None | I |
E/F | 0.9268 | likely_pathogenic | 0.9262 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.724 | deleterious | None | None | None | None | I |
E/G | 0.2077 | likely_benign | 0.2248 | benign | -0.797 | Destabilizing | 0.999 | D | 0.673 | prob.neutral | N | 0.506189568 | None | None | I |
E/H | 0.7003 | likely_pathogenic | 0.7337 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.703 | prob.delet. | None | None | None | None | I |
E/I | 0.7194 | likely_pathogenic | 0.7183 | pathogenic | 0.188 | Stabilizing | 0.999 | D | 0.725 | deleterious | None | None | None | None | I |
E/K | 0.2354 | likely_benign | 0.2594 | benign | 0.054 | Stabilizing | 0.997 | D | 0.745 | deleterious | N | 0.463384175 | None | None | I |
E/L | 0.7122 | likely_pathogenic | 0.7247 | pathogenic | 0.188 | Stabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
E/M | 0.7395 | likely_pathogenic | 0.7494 | pathogenic | 0.342 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
E/N | 0.4002 | ambiguous | 0.4313 | ambiguous | -0.425 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | I |
E/P | 0.7074 | likely_pathogenic | 0.7103 | pathogenic | -0.028 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
E/Q | 0.2182 | likely_benign | 0.245 | benign | -0.336 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.495215313 | None | None | I |
E/R | 0.3947 | ambiguous | 0.4333 | ambiguous | 0.304 | Stabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | I |
E/S | 0.3221 | likely_benign | 0.3494 | ambiguous | -0.597 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | I |
E/T | 0.402 | ambiguous | 0.4313 | ambiguous | -0.371 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | I |
E/V | 0.481 | ambiguous | 0.4881 | ambiguous | -0.028 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | D | 0.57382766 | None | None | I |
E/W | 0.9621 | likely_pathogenic | 0.964 | pathogenic | 0.054 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | I |
E/Y | 0.8511 | likely_pathogenic | 0.8572 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.725 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.