Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16945 | 51058;51059;51060 | chr2:178611396;178611395;178611394 | chr2:179476123;179476122;179476121 |
N2AB | 15304 | 46135;46136;46137 | chr2:178611396;178611395;178611394 | chr2:179476123;179476122;179476121 |
N2A | 14377 | 43354;43355;43356 | chr2:178611396;178611395;178611394 | chr2:179476123;179476122;179476121 |
N2B | 7880 | 23863;23864;23865 | chr2:178611396;178611395;178611394 | chr2:179476123;179476122;179476121 |
Novex-1 | 8005 | 24238;24239;24240 | chr2:178611396;178611395;178611394 | chr2:179476123;179476122;179476121 |
Novex-2 | 8072 | 24439;24440;24441 | chr2:178611396;178611395;178611394 | chr2:179476123;179476122;179476121 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.998 | N | 0.713 | 0.236 | 0.198526703765 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
N/S | rs1261279387 | None | 0.952 | N | 0.467 | 0.177 | 0.115124310173 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs1261279387 | None | 0.952 | N | 0.467 | 0.177 | 0.115124310173 | gnomAD-4.0.0 | 2.56544E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79175E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2356 | likely_benign | 0.2455 | benign | -0.456 | Destabilizing | 0.963 | D | 0.659 | prob.neutral | None | None | None | None | N |
N/C | 0.3967 | ambiguous | 0.4024 | ambiguous | 0.224 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
N/D | 0.1952 | likely_benign | 0.21 | benign | 0.048 | Stabilizing | 0.952 | D | 0.501 | neutral | N | 0.471602304 | None | None | N |
N/E | 0.4369 | ambiguous | 0.4597 | ambiguous | 0.059 | Stabilizing | 0.929 | D | 0.541 | neutral | None | None | None | None | N |
N/F | 0.6485 | likely_pathogenic | 0.6436 | pathogenic | -0.544 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
N/G | 0.3469 | ambiguous | 0.3705 | ambiguous | -0.701 | Destabilizing | 0.963 | D | 0.472 | neutral | None | None | None | None | N |
N/H | 0.1428 | likely_benign | 0.1481 | benign | -0.594 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | N | 0.469076569 | None | None | N |
N/I | 0.2913 | likely_benign | 0.2861 | benign | 0.118 | Stabilizing | 0.993 | D | 0.863 | deleterious | N | 0.450735318 | None | None | N |
N/K | 0.2417 | likely_benign | 0.2544 | benign | -0.062 | Destabilizing | 0.058 | N | 0.303 | neutral | N | 0.41397145 | None | None | N |
N/L | 0.3312 | likely_benign | 0.3229 | benign | 0.118 | Stabilizing | 0.989 | D | 0.674 | prob.neutral | None | None | None | None | N |
N/M | 0.3771 | ambiguous | 0.3601 | ambiguous | 0.381 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
N/P | 0.3294 | likely_benign | 0.3531 | ambiguous | -0.044 | Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
N/Q | 0.3669 | ambiguous | 0.3778 | ambiguous | -0.537 | Destabilizing | 0.989 | D | 0.722 | deleterious | None | None | None | None | N |
N/R | 0.3309 | likely_benign | 0.3515 | ambiguous | -0.036 | Destabilizing | 0.979 | D | 0.66 | prob.neutral | None | None | None | None | N |
N/S | 0.1168 | likely_benign | 0.121 | benign | -0.409 | Destabilizing | 0.952 | D | 0.467 | neutral | N | 0.36906992 | None | None | N |
N/T | 0.1447 | likely_benign | 0.1464 | benign | -0.235 | Destabilizing | 0.952 | D | 0.594 | neutral | N | 0.439617125 | None | None | N |
N/V | 0.2815 | likely_benign | 0.2768 | benign | -0.044 | Destabilizing | 0.995 | D | 0.82 | deleterious | None | None | None | None | N |
N/W | 0.8488 | likely_pathogenic | 0.8488 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
N/Y | 0.2289 | likely_benign | 0.229 | benign | -0.21 | Destabilizing | 0.998 | D | 0.841 | deleterious | N | 0.460586052 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.