Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16949 | 51070;51071;51072 | chr2:178611384;178611383;178611382 | chr2:179476111;179476110;179476109 |
N2AB | 15308 | 46147;46148;46149 | chr2:178611384;178611383;178611382 | chr2:179476111;179476110;179476109 |
N2A | 14381 | 43366;43367;43368 | chr2:178611384;178611383;178611382 | chr2:179476111;179476110;179476109 |
N2B | 7884 | 23875;23876;23877 | chr2:178611384;178611383;178611382 | chr2:179476111;179476110;179476109 |
Novex-1 | 8009 | 24250;24251;24252 | chr2:178611384;178611383;178611382 | chr2:179476111;179476110;179476109 |
Novex-2 | 8076 | 24451;24452;24453 | chr2:178611384;178611383;178611382 | chr2:179476111;179476110;179476109 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1368701506 | 0.222 | 0.992 | N | 0.581 | 0.284 | 0.292423486923 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/E | rs1368701506 | 0.222 | 0.992 | N | 0.581 | 0.284 | 0.292423486923 | gnomAD-4.0.0 | 1.59344E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6045 | likely_pathogenic | 0.6641 | pathogenic | -0.257 | Destabilizing | 0.964 | D | 0.498 | neutral | None | None | None | None | N |
K/C | 0.8125 | likely_pathogenic | 0.8611 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
K/D | 0.882 | likely_pathogenic | 0.9045 | pathogenic | -0.004 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
K/E | 0.4043 | ambiguous | 0.4683 | ambiguous | 0.045 | Stabilizing | 0.992 | D | 0.581 | neutral | N | 0.463963231 | None | None | N |
K/F | 0.9353 | likely_pathogenic | 0.9542 | pathogenic | -0.18 | Destabilizing | 0.995 | D | 0.771 | deleterious | None | None | None | None | N |
K/G | 0.7382 | likely_pathogenic | 0.7836 | pathogenic | -0.558 | Destabilizing | 0.998 | D | 0.512 | neutral | None | None | None | None | N |
K/H | 0.5532 | ambiguous | 0.603 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.555 | neutral | None | None | None | None | N |
K/I | 0.6328 | likely_pathogenic | 0.7084 | pathogenic | 0.488 | Stabilizing | 0.386 | N | 0.423 | neutral | N | 0.471659256 | None | None | N |
K/L | 0.6935 | likely_pathogenic | 0.7363 | pathogenic | 0.488 | Stabilizing | 0.931 | D | 0.483 | neutral | None | None | None | None | N |
K/M | 0.4747 | ambiguous | 0.5367 | ambiguous | 0.436 | Stabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
K/N | 0.7543 | likely_pathogenic | 0.8005 | pathogenic | 0.015 | Stabilizing | 0.998 | D | 0.585 | neutral | D | 0.589585652 | None | None | N |
K/P | 0.9796 | likely_pathogenic | 0.9825 | pathogenic | 0.27 | Stabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
K/Q | 0.2382 | likely_benign | 0.2665 | benign | -0.167 | Destabilizing | 0.998 | D | 0.611 | neutral | N | 0.469619813 | None | None | N |
K/R | 0.0975 | likely_benign | 0.1026 | benign | -0.34 | Destabilizing | 0.992 | D | 0.602 | neutral | N | 0.475243215 | None | None | N |
K/S | 0.6826 | likely_pathogenic | 0.7388 | pathogenic | -0.568 | Destabilizing | 0.994 | D | 0.627 | neutral | None | None | None | None | N |
K/T | 0.3543 | ambiguous | 0.4193 | ambiguous | -0.341 | Destabilizing | 0.993 | D | 0.579 | neutral | N | 0.507227346 | None | None | N |
K/V | 0.5156 | ambiguous | 0.5914 | pathogenic | 0.27 | Stabilizing | 0.931 | D | 0.493 | neutral | None | None | None | None | N |
K/W | 0.9226 | likely_pathogenic | 0.9409 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
K/Y | 0.8796 | likely_pathogenic | 0.9083 | pathogenic | 0.221 | Stabilizing | 0.998 | D | 0.704 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.