Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16956 | 51091;51092;51093 | chr2:178611263;178611262;178611261 | chr2:179475990;179475989;179475988 |
N2AB | 15315 | 46168;46169;46170 | chr2:178611263;178611262;178611261 | chr2:179475990;179475989;179475988 |
N2A | 14388 | 43387;43388;43389 | chr2:178611263;178611262;178611261 | chr2:179475990;179475989;179475988 |
N2B | 7891 | 23896;23897;23898 | chr2:178611263;178611262;178611261 | chr2:179475990;179475989;179475988 |
Novex-1 | 8016 | 24271;24272;24273 | chr2:178611263;178611262;178611261 | chr2:179475990;179475989;179475988 |
Novex-2 | 8083 | 24472;24473;24474 | chr2:178611263;178611262;178611261 | chr2:179475990;179475989;179475988 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1250320003 | None | 0.17 | N | 0.185 | 0.121 | 0.312001716656 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs1250320003 | None | 0.17 | N | 0.185 | 0.121 | 0.312001716656 | gnomAD-4.0.0 | 1.30271E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.61135E-05 | 0 | 3.2078E-05 |
T/I | rs1040561744 | 0.179 | 0.1 | D | 0.251 | 0.281 | 0.427254322456 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | I | None | 0 | 5.84E-05 | None | 0 | 5.66E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1040561744 | 0.179 | 0.1 | D | 0.251 | 0.281 | 0.427254322456 | gnomAD-4.0.0 | 2.05468E-06 | None | None | None | None | I | None | 0 | 4.48773E-05 | None | 0 | 2.53627E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/K | rs1040561744 | -0.054 | 0.991 | N | 0.535 | 0.451 | 0.519889284407 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.67336E-04 |
T/K | rs1040561744 | -0.054 | 0.991 | N | 0.535 | 0.451 | 0.519889284407 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 3.16456E-03 | 0 | 0 | 0 |
T/K | rs1040561744 | -0.054 | 0.991 | N | 0.535 | 0.451 | 0.519889284407 | gnomAD-4.0.0 | 3.10166E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 3.29598E-04 | 2.54423E-06 | 0 | 0 |
T/S | rs1250320003 | -0.438 | 0.885 | N | 0.383 | 0.143 | 0.353548585375 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
T/S | rs1250320003 | -0.438 | 0.885 | N | 0.383 | 0.143 | 0.353548585375 | gnomAD-4.0.0 | 6.84915E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99928E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0855 | likely_benign | 0.0797 | benign | -0.428 | Destabilizing | 0.17 | N | 0.185 | neutral | N | 0.508993292 | None | None | I |
T/C | 0.4568 | ambiguous | 0.4594 | ambiguous | -0.398 | Destabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | I |
T/D | 0.3703 | ambiguous | 0.3355 | benign | 0.193 | Stabilizing | 0.993 | D | 0.555 | neutral | None | None | None | None | I |
T/E | 0.256 | likely_benign | 0.2344 | benign | 0.181 | Stabilizing | 0.993 | D | 0.537 | neutral | None | None | None | None | I |
T/F | 0.2937 | likely_benign | 0.2809 | benign | -0.701 | Destabilizing | 0.986 | D | 0.653 | neutral | None | None | None | None | I |
T/G | 0.2777 | likely_benign | 0.2544 | benign | -0.633 | Destabilizing | 0.953 | D | 0.519 | neutral | None | None | None | None | I |
T/H | 0.2989 | likely_benign | 0.2728 | benign | -0.777 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | I |
T/I | 0.1632 | likely_benign | 0.161 | benign | 0.009 | Stabilizing | 0.1 | N | 0.251 | neutral | D | 0.53867384 | None | None | I |
T/K | 0.2182 | likely_benign | 0.2056 | benign | -0.385 | Destabilizing | 0.991 | D | 0.535 | neutral | N | 0.504119126 | None | None | I |
T/L | 0.1307 | likely_benign | 0.1249 | benign | 0.009 | Stabilizing | 0.807 | D | 0.465 | neutral | None | None | None | None | I |
T/M | 0.1094 | likely_benign | 0.1038 | benign | -0.114 | Destabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | I |
T/N | 0.1325 | likely_benign | 0.1229 | benign | -0.321 | Destabilizing | 0.998 | D | 0.475 | neutral | None | None | None | None | I |
T/P | 0.6845 | likely_pathogenic | 0.5944 | pathogenic | -0.105 | Destabilizing | 0.991 | D | 0.559 | neutral | D | 0.593113702 | None | None | I |
T/Q | 0.2224 | likely_benign | 0.2053 | benign | -0.41 | Destabilizing | 0.998 | D | 0.561 | neutral | None | None | None | None | I |
T/R | 0.2052 | likely_benign | 0.1839 | benign | -0.169 | Destabilizing | 0.991 | D | 0.561 | neutral | N | 0.509431111 | None | None | I |
T/S | 0.1065 | likely_benign | 0.1029 | benign | -0.555 | Destabilizing | 0.885 | D | 0.383 | neutral | N | 0.506519155 | None | None | I |
T/V | 0.1212 | likely_benign | 0.1243 | benign | -0.105 | Destabilizing | 0.591 | D | 0.407 | neutral | None | None | None | None | I |
T/W | 0.721 | likely_pathogenic | 0.673 | pathogenic | -0.742 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
T/Y | 0.3714 | ambiguous | 0.3361 | benign | -0.441 | Destabilizing | 0.993 | D | 0.667 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.