Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16958 | 51097;51098;51099 | chr2:178611257;178611256;178611255 | chr2:179475984;179475983;179475982 |
N2AB | 15317 | 46174;46175;46176 | chr2:178611257;178611256;178611255 | chr2:179475984;179475983;179475982 |
N2A | 14390 | 43393;43394;43395 | chr2:178611257;178611256;178611255 | chr2:179475984;179475983;179475982 |
N2B | 7893 | 23902;23903;23904 | chr2:178611257;178611256;178611255 | chr2:179475984;179475983;179475982 |
Novex-1 | 8018 | 24277;24278;24279 | chr2:178611257;178611256;178611255 | chr2:179475984;179475983;179475982 |
Novex-2 | 8085 | 24478;24479;24480 | chr2:178611257;178611256;178611255 | chr2:179475984;179475983;179475982 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.004 | N | 0.229 | 0.045 | 0.134241683229 | gnomAD-4.0.0 | 1.59477E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43592E-05 | 0 |
D/V | None | None | 0.83 | N | 0.798 | 0.446 | 0.301455362545 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2431 | likely_benign | 0.1939 | benign | -0.11 | Destabilizing | 0.41 | N | 0.655 | neutral | N | 0.456015178 | None | None | N |
D/C | 0.697 | likely_pathogenic | 0.6063 | pathogenic | -0.019 | Destabilizing | 0.993 | D | 0.801 | deleterious | None | None | None | None | N |
D/E | 0.2278 | likely_benign | 0.1586 | benign | -0.322 | Destabilizing | 0.004 | N | 0.229 | neutral | N | 0.446097099 | None | None | N |
D/F | 0.6305 | likely_pathogenic | 0.5483 | ambiguous | 0.031 | Stabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
D/G | 0.3495 | ambiguous | 0.2686 | benign | -0.324 | Destabilizing | 0.581 | D | 0.652 | neutral | N | 0.508562755 | None | None | N |
D/H | 0.3761 | ambiguous | 0.3001 | benign | 0.2 | Stabilizing | 0.974 | D | 0.785 | deleterious | N | 0.508562755 | None | None | N |
D/I | 0.3604 | ambiguous | 0.2913 | benign | 0.407 | Stabilizing | 0.929 | D | 0.82 | deleterious | None | None | None | None | N |
D/K | 0.5346 | ambiguous | 0.428 | ambiguous | 0.347 | Stabilizing | 0.764 | D | 0.72 | prob.delet. | None | None | None | None | N |
D/L | 0.4003 | ambiguous | 0.3135 | benign | 0.407 | Stabilizing | 0.866 | D | 0.795 | deleterious | None | None | None | None | N |
D/M | 0.6559 | likely_pathogenic | 0.576 | pathogenic | 0.378 | Stabilizing | 0.993 | D | 0.808 | deleterious | None | None | None | None | N |
D/N | 0.1294 | likely_benign | 0.1173 | benign | -0.01 | Destabilizing | 0.83 | D | 0.705 | prob.neutral | N | 0.477108587 | None | None | N |
D/P | 0.8622 | likely_pathogenic | 0.8216 | pathogenic | 0.258 | Stabilizing | 0.929 | D | 0.785 | deleterious | None | None | None | None | N |
D/Q | 0.427 | ambiguous | 0.3362 | benign | 0.044 | Stabilizing | 0.764 | D | 0.776 | deleterious | None | None | None | None | N |
D/R | 0.5552 | ambiguous | 0.4593 | ambiguous | 0.539 | Stabilizing | 0.764 | D | 0.779 | deleterious | None | None | None | None | N |
D/S | 0.1816 | likely_benign | 0.152 | benign | -0.1 | Destabilizing | 0.48 | N | 0.586 | neutral | None | None | None | None | N |
D/T | 0.3086 | likely_benign | 0.247 | benign | 0.07 | Stabilizing | 0.866 | D | 0.725 | prob.delet. | None | None | None | None | N |
D/V | 0.2238 | likely_benign | 0.1762 | benign | 0.258 | Stabilizing | 0.83 | D | 0.798 | deleterious | N | 0.439630128 | None | None | N |
D/W | 0.9165 | likely_pathogenic | 0.882 | pathogenic | 0.152 | Stabilizing | 0.993 | D | 0.821 | deleterious | None | None | None | None | N |
D/Y | 0.3132 | likely_benign | 0.2532 | benign | 0.273 | Stabilizing | 0.991 | D | 0.828 | deleterious | D | 0.570023803 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.