Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16960 | 51103;51104;51105 | chr2:178611251;178611250;178611249 | chr2:179475978;179475977;179475976 |
N2AB | 15319 | 46180;46181;46182 | chr2:178611251;178611250;178611249 | chr2:179475978;179475977;179475976 |
N2A | 14392 | 43399;43400;43401 | chr2:178611251;178611250;178611249 | chr2:179475978;179475977;179475976 |
N2B | 7895 | 23908;23909;23910 | chr2:178611251;178611250;178611249 | chr2:179475978;179475977;179475976 |
Novex-1 | 8020 | 24283;24284;24285 | chr2:178611251;178611250;178611249 | chr2:179475978;179475977;179475976 |
Novex-2 | 8087 | 24484;24485;24486 | chr2:178611251;178611250;178611249 | chr2:179475978;179475977;179475976 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.005 | N | 0.137 | 0.185 | 0.238705975628 | gnomAD-4.0.0 | 6.84804E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99888E-07 | 0 | 0 |
E/Q | rs1210274436 | 0.075 | 0.022 | N | 0.129 | 0.09 | 0.279370189704 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
E/Q | rs1210274436 | 0.075 | 0.022 | N | 0.129 | 0.09 | 0.279370189704 | gnomAD-4.0.0 | 6.84804E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.1609E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1372 | likely_benign | 0.1366 | benign | 0.041 | Stabilizing | 0.625 | D | 0.422 | neutral | N | 0.484932479 | None | None | I |
E/C | 0.7809 | likely_pathogenic | 0.7781 | pathogenic | -0.228 | Destabilizing | 0.998 | D | 0.482 | neutral | None | None | None | None | I |
E/D | 0.1218 | likely_benign | 0.1206 | benign | -0.288 | Destabilizing | 0.625 | D | 0.412 | neutral | N | 0.481438678 | None | None | I |
E/F | 0.7314 | likely_pathogenic | 0.7281 | pathogenic | -0.049 | Destabilizing | 0.991 | D | 0.457 | neutral | None | None | None | None | I |
E/G | 0.1352 | likely_benign | 0.1354 | benign | -0.055 | Destabilizing | 0.801 | D | 0.459 | neutral | N | 0.497586807 | None | None | I |
E/H | 0.3773 | ambiguous | 0.3709 | ambiguous | 0.6 | Stabilizing | 0.974 | D | 0.451 | neutral | None | None | None | None | I |
E/I | 0.3725 | ambiguous | 0.3617 | ambiguous | 0.233 | Stabilizing | 0.974 | D | 0.467 | neutral | None | None | None | None | I |
E/K | 0.1202 | likely_benign | 0.1148 | benign | 0.37 | Stabilizing | 0.005 | N | 0.137 | neutral | N | 0.49906526 | None | None | I |
E/L | 0.3443 | ambiguous | 0.3384 | benign | 0.233 | Stabilizing | 0.842 | D | 0.47 | neutral | None | None | None | None | I |
E/M | 0.4269 | ambiguous | 0.4163 | ambiguous | -0.037 | Destabilizing | 0.991 | D | 0.451 | neutral | None | None | None | None | I |
E/N | 0.209 | likely_benign | 0.2147 | benign | 0.21 | Stabilizing | 0.842 | D | 0.432 | neutral | None | None | None | None | I |
E/P | 0.3266 | likely_benign | 0.3151 | benign | 0.186 | Stabilizing | 0.974 | D | 0.448 | neutral | None | None | None | None | I |
E/Q | 0.1141 | likely_benign | 0.1111 | benign | 0.205 | Stabilizing | 0.022 | N | 0.129 | neutral | N | 0.467646623 | None | None | I |
E/R | 0.2169 | likely_benign | 0.2112 | benign | 0.6 | Stabilizing | 0.728 | D | 0.402 | neutral | None | None | None | None | I |
E/S | 0.1736 | likely_benign | 0.1845 | benign | 0.047 | Stabilizing | 0.842 | D | 0.399 | neutral | None | None | None | None | I |
E/T | 0.2004 | likely_benign | 0.1978 | benign | 0.133 | Stabilizing | 0.842 | D | 0.463 | neutral | None | None | None | None | I |
E/V | 0.216 | likely_benign | 0.207 | benign | 0.186 | Stabilizing | 0.891 | D | 0.447 | neutral | N | 0.505918342 | None | None | I |
E/W | 0.8684 | likely_pathogenic | 0.8588 | pathogenic | -0.031 | Destabilizing | 0.998 | D | 0.527 | neutral | None | None | None | None | I |
E/Y | 0.6064 | likely_pathogenic | 0.585 | pathogenic | 0.168 | Stabilizing | 0.991 | D | 0.469 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.