Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16961 | 51106;51107;51108 | chr2:178611248;178611247;178611246 | chr2:179475975;179475974;179475973 |
N2AB | 15320 | 46183;46184;46185 | chr2:178611248;178611247;178611246 | chr2:179475975;179475974;179475973 |
N2A | 14393 | 43402;43403;43404 | chr2:178611248;178611247;178611246 | chr2:179475975;179475974;179475973 |
N2B | 7896 | 23911;23912;23913 | chr2:178611248;178611247;178611246 | chr2:179475975;179475974;179475973 |
Novex-1 | 8021 | 24286;24287;24288 | chr2:178611248;178611247;178611246 | chr2:179475975;179475974;179475973 |
Novex-2 | 8088 | 24487;24488;24489 | chr2:178611248;178611247;178611246 | chr2:179475975;179475974;179475973 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.825 | N | 0.47 | 0.091 | 0.115124310173 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1034 | likely_benign | 0.1005 | benign | -0.271 | Destabilizing | 0.825 | D | 0.47 | neutral | N | 0.436782143 | None | None | N |
T/C | 0.4951 | ambiguous | 0.4987 | ambiguous | -0.16 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
T/D | 0.3811 | ambiguous | 0.3509 | ambiguous | 0.168 | Stabilizing | 0.991 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/E | 0.3358 | likely_benign | 0.3002 | benign | 0.117 | Stabilizing | 0.991 | D | 0.718 | prob.delet. | None | None | None | None | N |
T/F | 0.3525 | ambiguous | 0.3391 | benign | -0.686 | Destabilizing | 0.995 | D | 0.851 | deleterious | None | None | None | None | N |
T/G | 0.2486 | likely_benign | 0.2435 | benign | -0.421 | Destabilizing | 0.938 | D | 0.661 | neutral | None | None | None | None | N |
T/H | 0.3146 | likely_benign | 0.2913 | benign | -0.585 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
T/I | 0.2793 | likely_benign | 0.2629 | benign | 0.012 | Stabilizing | 0.994 | D | 0.791 | deleterious | N | 0.44602335 | None | None | N |
T/K | 0.2013 | likely_benign | 0.1883 | benign | -0.28 | Destabilizing | 0.991 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/L | 0.161 | likely_benign | 0.1534 | benign | 0.012 | Stabilizing | 0.968 | D | 0.626 | neutral | None | None | None | None | N |
T/M | 0.1176 | likely_benign | 0.1063 | benign | -0.074 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
T/N | 0.1122 | likely_benign | 0.105 | benign | 0.005 | Stabilizing | 0.988 | D | 0.656 | neutral | N | 0.436485595 | None | None | N |
T/P | 0.2097 | likely_benign | 0.1646 | benign | -0.054 | Destabilizing | 0.994 | D | 0.796 | deleterious | N | 0.419318272 | None | None | N |
T/Q | 0.2432 | likely_benign | 0.2268 | benign | -0.154 | Destabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | N |
T/R | 0.2 | likely_benign | 0.1847 | benign | -0.024 | Destabilizing | 0.991 | D | 0.798 | deleterious | None | None | None | None | N |
T/S | 0.1275 | likely_benign | 0.1254 | benign | -0.191 | Destabilizing | 0.234 | N | 0.345 | neutral | N | 0.445116798 | None | None | N |
T/V | 0.2302 | likely_benign | 0.2215 | benign | -0.054 | Destabilizing | 0.968 | D | 0.509 | neutral | None | None | None | None | N |
T/W | 0.6607 | likely_pathogenic | 0.659 | pathogenic | -0.755 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
T/Y | 0.3393 | likely_benign | 0.3337 | benign | -0.459 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.